RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FAM83HQ6ZRV2 1179 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 CHST15Q7LFX5 561 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 RD3Q7Z3Z2 195 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 SLC22A15Q8IZD6 547 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 LILRA3Q8N6C8 439 aaPredicted RBP16.2■□□□□ 0.18
GCDH-213ENST00000590627 GPBAR1Q8TDU6 330 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 EEF1AKMT1Q8WVE0 214 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 TMEM159Q96B96 161 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 APOPT1Q96IL0 206 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 GPR78Q96P69 363 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 TMEM168Q9H0V1 697 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 KLC4Q9NSK0 619 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 PCMTD2Q9NV79 361 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 ST14Q9Y5Y6 855 aa16.2■□□□□ 0.18
GCDH-213ENST00000590627 TEX51A0A1B0GUA7 166 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 PRPF4O43172 522 aaKnown RBP eCLIP16.19■□□□□ 0.181e-7■■□□□ 11.4
GCDH-213ENST00000590627 TYROBPO43914 113 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 MPC1LP0DKB6 136 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 CREB1P16220 341 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 JUNDP17535 347 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 SLC18A1P54219 525 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 ATP6V0D1P61421 351 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 IRF9Q00978 393 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 CTBSQ01459 385 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 CSHL1Q14406 222 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 FAM83EQ2M2I3 478 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 TSNAXIP1Q2TAA8 658 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 SYTL3Q4VX76 610 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 AGAP9Q5VTM2 703 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 WASH2PQ6VEQ5 465 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 VRK3Q8IV63 474 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 SPNS2Q8IVW8 549 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 LSMEM2Q8N112 164 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 PLD6Q8N2A8 252 aaKnown RBP16.19■□□□□ 0.18
GCDH-213ENST00000590627 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 SLC39A7Q92504 469 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 LINGO1Q96FE5 620 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 APOLD1Q96LR9 279 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 ZNF578Q96N58 590 aaPredicted RBP16.19■□□□□ 0.18
GCDH-213ENST00000590627 DEPDC7Q96QD5 511 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 SLC13A1Q9BZW2 595 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 OR52A5Q9H2C5 316 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 TCEAL2Q9H3H9 227 aaPredicted RBP16.19■□□□□ 0.18
GCDH-213ENST00000590627 NMRAL1Q9HBL8 299 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 WASH6PQ9NQA3 447 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 DNAJC28Q9NX36 388 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 PLEKHM1Q9Y4G2 1056 aa16.19■□□□□ 0.18
GCDH-213ENST00000590627 LRP4O75096 1905 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 COPEO14579 308 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 GLRA3O75311 464 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
GCDH-213ENST00000590627 BRAFP15056 766 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 CD1DP15813 335 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 IDSP22304 550 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 GMPRP36959 345 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 MAPK9P45984 424 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 PREPP48147 710 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 TLE3Q04726 772 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 C19orf57Q0VDD7 668 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 ILF3Q12906 894 aaKnown RBP eCLIP16.18■□□□□ 0.18
GCDH-213ENST00000590627 ACAP2Q15057 778 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 ZNF542PQ5EBM4 170 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 CDHR3Q6ZTQ4 885 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 GPR155Q7Z3F1 870 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 NRROSQ86YC3 692 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 RASGRP3Q8IV61 690 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 SDR16C5Q8N3Y7 309 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 ZNF248Q8NDW4 579 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 NXNL1Q96CM4 212 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 GSDMCQ9BYG8 508 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 TFB2MQ9H5Q4 396 aaKnown RBP16.18■□□□□ 0.18
GCDH-213ENST00000590627 NCKIPSDQ9NZQ3 722 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 APOBEC3BQ9UH17 382 aaKnown RBP16.18■□□□□ 0.18
GCDH-213ENST00000590627 RUVBL2Q9Y230 463 aaKnown RBP16.18■□□□□ 0.18
GCDH-213ENST00000590627 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 DNAJC16Q9Y2G8 782 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 CSNK1G3Q9Y6M4 447 aa16.18■□□□□ 0.18
GCDH-213ENST00000590627 LY6G6EA0A0G2JKS1 128 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 H3BM21 787 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 H3BQF6 201 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 MATN4O95460 622 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 CTSEP14091 401 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 ACADLP28330 430 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 PDHA2P29803 388 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 KPNA2P52292 529 aaKnown RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 PCBP4P57723 403 aaKnown RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 CAPRIN2Q6IMN6 1127 aaKnown RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 ZCCHC8Q6NZY4 707 aaKnown RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 KLC3Q6P597 504 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 ABRAXAS1Q6UWZ7 409 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 PIWIL4Q7Z3Z4 852 aaKnown RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 ISCA2Q86U28 154 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 SPACA3Q8IXA5 215 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 MYO1HQ8N1T3 1032 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 FSTL5Q8N475 847 aaPredicted RBP16.17■□□□□ 0.18
GCDH-213ENST00000590627 SPATA6LQ8N4H0 392 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 RHEBL1Q8TAI7 183 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 ASB11Q8WXH4 323 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 KIAA1191Q96A73 305 aa16.17■□□□□ 0.18
GCDH-213ENST00000590627 TSNARE1Q96NA8 513 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms