RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ADGRF3Q8IZF5 1079 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 CARFQ8N187 725 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 LSM14AQ8ND56 463 aaKnown RBP11.71□□□□□ -0.53
TPM4-212ENST00000590180 FAM136AQ96C01 138 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 SIGLEC10Q96LC7 697 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
TPM4-212ENST00000590180 PCYOX1Q9UHG3 505 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 PADI1Q9ULC6 663 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 CDYLQ9Y232 598 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 H3BMM5 538 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 NKX2-8O15522 239 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 NIPSNAP2O75323 286 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 KATNA1O75449 491 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SLCO2B1O94956 709 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 ESR1P03372 595 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 MT-ND3P03897 115 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 PRB1P04280 392 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CHRM5P08912 532 aaPredicted RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 TPBGLP0DKB5 382 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SPTBP11277 2137 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 PKMP14618 531 aaKnown RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 PVRP15151 417 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 ST6GAL1P15907 406 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 OGNP20774 298 aaKnown RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 DLSTP36957 453 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CTBP1Q13363 440 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 LY6DQ14210 128 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 MAP7Q14244 749 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 LONRF1Q17RB8 773 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TYSND1Q2T9J0 566 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CTSL3PQ5NE16 218 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 RNASEH2BQ5TBB1 312 aaKnown RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 ZNF470Q6ECI4 717 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CENPUQ71F23 418 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TMEM135Q86UB9 458 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CILP2Q8IUL8 1156 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TMEM126BQ8IUX1 230 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 C2orf73Q8N5S3 287 aaPredicted RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 LPGAT1Q92604 370 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TTC9Q92623 222 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 EXTL1Q92935 676 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 WBP1Q96G27 269 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 FOPNLQ96NB1 174 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 RUNDC3BQ96NL0 473 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 BIRC8Q96P09 236 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 FCRL4Q96PJ5 515 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TRAPPC9Q96Q05 1148 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SLC12A9Q9BXP2 914 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CCDC68Q9H2F9 335 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 FANCEQ9HB96 536 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SPHK1Q9NYA1 384 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 OR6C2Q9NZP2 312 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 CIDEBQ9UHD4 219 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 IL17BQ9UHF5 180 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
TPM4-212ENST00000590180 SERTAD3Q9UJW9 196 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 BTRCQ9Y297 605 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 MGAQ8IWI9 3026 aa11.7□□□□□ -0.54
TPM4-212ENST00000590180 SEC16AO15027 2179 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 PIEZO2Q9H5I5 2752 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 BPTFQ12830 3046 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 ZCWPW2A0A1B0GU75 182 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 ZNF891A8MT65 544 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 E5RI56 91 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 TK2O00142 265 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 SCRG1O75711 98 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 USP1O94782 785 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 TIAF1O95411 115 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 S1PR4O95977 384 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 F7P08709 466 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 UGT2B7P16662 529 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 TCN2P20062 427 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 DR1Q01658 176 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 DHX9Q08211 1270 aaKnown RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 TBR1Q16650 682 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 KYNUQ16719 465 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 BBS9Q3SYG4 887 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 ZNF789Q5FWF6 425 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 PLEKHS1Q5SXH7 462 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 C16orf46Q6P387 395 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 SPESP1Q6UW49 350 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 PCSK4Q6UW60 755 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 UNC5DQ6UXZ4 953 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 SYDE1Q6ZW31 735 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 TRIM73Q86UV7 250 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 DENND6AQ8IWF6 608 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 AGGF1Q8N302 714 aaeCLIP11.69□□□□□ -0.54
TPM4-212ENST00000590180 LMNTD1Q8N9Z9 388 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 OR8K5Q8NH50 307 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 SLCO2A1Q92959 643 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 ZNF501Q96CX3 271 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 SLC45A3Q96JT2 553 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 IL17FQ96PD4 163 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms