RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ARFIP2P53365 341 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 SH3BP2P78314 561 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 CAPRIN2Q6IMN6 1127 aaKnown RBP16.99■□□□□ 0.31
CXXC1-212ENST00000589940 MFSD2AQ8NA29 543 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 MAGEC3Q8TD91 643 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 TMEM120AQ9BXJ8 343 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 TRNAU1APQ9NX07 287 aaKnown RBP16.99■□□□□ 0.31
CXXC1-212ENST00000589940 SLCO1B7G3V0H7 640 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 K7EPI3 171 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 MYO1CO00159 1063 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 MATN2O00339 956 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 CCNT2O60583 730 aaKnown RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 RPN2P04844 631 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 GDF5P43026 501 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 SLC6A12P48065 614 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 RACK1P63244 317 aaKnown RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 ZXDCQ2QGD7 858 aaPredicted RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 GOLGA7Q7Z5G4 137 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 DCP2Q8IU60 420 aaKnown RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 HID1Q8IV36 788 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 AGAP11Q8TF27 550 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 PKP4Q99569 1192 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 DUSP15Q9H1R2 295 aaPredicted RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 TNFRSF12AQ9NP84 129 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 MID1IP1Q9NPA3 183 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 WDR37Q9Y2I8 494 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 ZDBF2Q9HCK1 2354 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 ZFC3H1O60293 1989 aaKnown RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 ZNF195O14628 629 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 CD38P28907 300 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 FNTBP49356 437 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 CTBSQ01459 385 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 FZD2Q14332 565 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 RBBP7Q16576 425 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 LRRC70Q7Z2Q7 622 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 MAVSQ7Z434 540 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 IQCHQ86VS3 1027 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 WDR5BQ86VZ2 330 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 DCUN1D3Q8IWE4 304 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 TMEFF1Q8IYR6 380 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 TEX9Q8N6V9 391 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 TMEM168Q9H0V1 697 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 STOX2Q9P2F5 926 aaPredicted RBP16.98■□□□□ 0.31
CXXC1-212ENST00000589940 VTI1BQ9UEU0 232 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 TTC28Q96AY4 2481 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 EML5Q05BV3 1969 aa16.98■□□□□ 0.31
CXXC1-212ENST00000589940 A0A1W2PR77 199 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 TMEM233B4DJY2 109 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 HDAC3O15379 428 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 RASGRP1O95267 797 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 SLC16A8O95907 504 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 MAOBP27338 520 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 PIK3CGP48736 1102 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 PTCHD3Q3KNS1 767 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 UAP1L1Q3KQV9 507 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 C1orf210Q8IVY1 113 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 AFAP1L2Q8N4X5 818 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 OR5AR1Q8NGP9 310 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 OR9A1PQ8NGU1 263 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 OR5K2Q8NHB8 316 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 FAR2Q96K12 515 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 ZNF382Q96SR6 550 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 MIR1-1HGQ9H1L0 117 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 SLC32A1Q9H598 525 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 NOL11Q9H8H0 719 aaKnown RBP16.97■□□□□ 0.31
CXXC1-212ENST00000589940 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 ANGPTL3Q9Y5C1 460 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 GON4LQ3T8J9 2241 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 PDZK1P1A8MUH7 402 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 TNFP01375 233 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 IMPA1P29218 277 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 EIF2B5Q13144 721 aaKnown RBP16.97■□□□□ 0.31
CXXC1-212ENST00000589940 AGTRAPQ6RW13 159 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 PARGQ86W56 976 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 PHC3Q8NDX5 983 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 DNASE2BQ8WZ79 361 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 RAD51AP1Q96B01 352 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 C12orf66Q96MD2 445 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 ATG10Q9H0Y0 220 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 TRIT1Q9H3H1 467 aaKnown RBP16.97■□□□□ 0.31
CXXC1-212ENST00000589940 STN1Q9H668 368 aaKnown RBP16.97■□□□□ 0.31
CXXC1-212ENST00000589940 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 TM9SF3Q9HD45 589 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 CIDEBQ9UHD4 219 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 STK38LQ9Y2H1 464 aa16.97■□□□□ 0.31
CXXC1-212ENST00000589940 CFAP20Q9Y6A4 193 aaKnown RBP16.97■□□□□ 0.31
CXXC1-212ENST00000589940 A0A1B0GTL3 188 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 GIPC1O14908 333 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 ESRRBO95718 433 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 WNT1P04628 370 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 FGF4P08620 206 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 EPB42P16452 691 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 AK4P27144 223 aaPredicted RBP16.96■□□□□ 0.31
CXXC1-212ENST00000589940 PKNOX1P55347 436 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 GPRIN3Q6ZVF9 776 aa16.96■□□□□ 0.31
CXXC1-212ENST00000589940 C1orf216Q8TAB5 229 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms