RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GPR1P46091 355 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 GTF2A1P52655 376 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 THOP1P52888 689 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 RPA4Q13156 261 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ENPP2Q13822 863 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 BOP1Q14137 746 aaKnown RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 MAP7Q14244 749 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 GRIN2CQ14957 1233 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 AGERQ15109 404 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 NR6A1Q15406 480 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 IMPG1Q17R60 797 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ITPRIPL2Q3MIP1 535 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 VPS26BQ4G0F5 336 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 AASDHQ4L235 1098 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 LRRC73Q5JTD7 316 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 TCHHL1Q5QJ38 904 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 SYCE2Q6PIF2 218 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 MTSS1LQ765P7 747 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 DET1Q7L5Y6 550 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ZFAND4Q86XD8 727 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 AQP12AQ8IXF9 295 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 SLC22A15Q8IZD6 547 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 SFRP1Q8N474 314 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 RASGEF1AQ8N9B8 481 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 LRRC58Q96CX6 371 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 CCDC97Q96F63 343 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 ZNF184Q99676 751 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 SH3GL1Q99961 368 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 TRMT61BQ9BVS5 477 aaKnown RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 DPEP2Q9H4A9 486 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 SLC52A3Q9NQ40 469 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 NMRK1Q9NWW6 199 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 C1orf109Q9NX04 203 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 MCM8Q9UJA3 840 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ZNF490Q9ULM2 529 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 LRCH1Q9Y2L9 728 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ASB1Q9Y576 335 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 SCN8AQ9UQD0 1980 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ADH1BP00325 375 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 IL6P05231 212 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 EPHX1P07099 455 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 LAMP2P13473 410 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 C6P13671 934 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 HSD3B1P14060 373 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 SLC2A4P14672 509 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 JUPP14923 745 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 XRCC1P18887 633 aaPredicted RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 C5AR1P21730 350 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 HSD3B2P26439 372 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 PBX2P40425 430 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 HNF4AP41235 474 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 HNRNPFP52597 415 aaKnown RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 CLNS1AP54105 237 aaKnown RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 DIO3P55073 304 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 EEFSECP57772 596 aaKnown RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 SESN3P58005 492 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 RHDQ02161 417 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 ADAM15Q13444 863 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 ABRAXAS2Q15018 415 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 PTCHD3Q3KNS1 767 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 FBXO48Q5FWF7 155 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 IL23RQ5VWK5 629 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 TLDC1Q6P9B6 456 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 CYP20A1Q6UW02 462 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 ADAMTSL4Q6UY14 1074 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 AADATQ8N5Z0 425 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 SNX31Q8N9S9 440 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 ADCY4Q8NFM4 1077 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 OR9I1Q8NGQ6 314 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 OR2T11Q8NH01 316 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 PROKR1Q8TCW9 393 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 GDPD5Q8WTR4 605 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 CMTM7Q96FZ5 175 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 ZFYVE19Q96K21 471 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 LRGUKQ96M69 825 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 NECTIN4Q96NY8 510 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 CDK15Q96Q40 435 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 OSBPL6Q9BZF3 934 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 KLHL4Q9C0H6 718 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 MTG2Q9H4K7 406 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 ELOVL6Q9H5J4 265 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 LRTM1Q9HBL6 345 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 PRSS16Q9NQE7 514 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 MAP10Q9P2G4 905 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 KLQ9UEF7 1012 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 CNOT6Q9ULM6 557 aaKnown RBP10.14□□□□□ -0.79
VPS25-203ENST00000589520 CCL27Q9Y4X3 112 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 FADS3Q9Y5Q0 445 aa10.14□□□□□ -0.79
VPS25-203ENST00000589520 OTOL1A6NHN0 477 aaPredicted RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 OR2AG2A6NM03 316 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 H3BM21 787 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 CLGNO14967 610 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 PRMT3O60678 531 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 KCNJ13O60928 360 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 C8BP07358 591 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms