RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GPLD1P80108 840 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 CFHR1Q03591 330 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 RAPH1Q70E73 1250 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 EPS8L3Q8TE67 593 aaKnown RBP18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 LCN9Q8WX39 176 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 AHCYL2Q96HN2 611 aaKnown RBP18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 XKR8Q9H6D3 395 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 ADAMTS6Q9UKP5 1117 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 IKZF3Q9UKT9 509 aa18.44■□□□□ 0.54
CLPTM1-209ENST00000588855 CCDC151A5D8V7 595 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 SMIM23A6NLE4 172 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 GFYI3L273 518 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 CATP04040 527 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 CRABP2P29373 138 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 CCNFP41002 786 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 SLCO1A2P46721 670 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 CAPZBP47756 277 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 SPIDRQ14159 915 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 USP53Q70EK8 1073 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 UBE2R2Q712K3 238 aaPredicted RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 TMPRSS9Q7Z410 1059 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 SPATA6LQ8N4H0 392 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 OR4E2Q8NGC2 313 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 DLG3Q92796 817 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 PDLIM5Q96HC4 596 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 GFM1Q96RP9 751 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 NUDT22Q9BRQ3 303 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 UNKQ9C0B0 810 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 TFB2MQ9H5Q4 396 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-209ENST00000588855 D6RAR5 112 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 ERLIN1O75477 346 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 KRT37O76014 449 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 SNRPAP09012 282 aaKnown RBP18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 CCDC166P0CW27 439 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 CDK4P11802 303 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 AMD1P17707 334 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 MAGEA12P43365 314 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 N4BP2L1Q5TBK1 243 aaPredicted RBP18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 HES3Q5TGS1 186 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 TTC23LQ6PF05 361 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 DGLUCYQ7Z3D6 616 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 WDR48Q8TAF3 677 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 ADAMTS14Q8WXS8 1223 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 ISL2Q96A47 359 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 RAD51AP1Q96B01 352 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 IL17FQ96PD4 163 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 MENTQ9BUN1 341 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 SRMSQ9H3Y6 488 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 EPB41L1Q9H4G0 881 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 TBK1Q9UHD2 729 aa18.42■□□□□ 0.54
CLPTM1-209ENST00000588855 OR6C74A6NCV1 312 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 NPEPPSL1A6NEC2 478 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 CDC7O00311 574 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 CPNE6O95741 557 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 C2P06681 752 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 C8GP07360 202 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 TYK2P29597 1187 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 PKLRP30613 574 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 SHMT2P34897 504 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 IRF9Q00978 393 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 DLG1Q12959 904 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 SP140Q13342 867 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 CSHL1Q14406 222 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 LGSNQ5TDP6 509 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 CDCP2Q5VXM1 449 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 AMIGO1Q86WK6 493 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 LMNTD1Q8N9Z9 388 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 FBXO15Q8NCQ5 510 aaPredicted RBP18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 MAGEC3Q8TD91 643 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 NCSTNQ92542 709 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 UBXN10Q96LJ8 280 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 DERL2Q9GZP9 239 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 PPCSQ9HAB8 311 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 EURLQ9NYK6 297 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 TMEM9Q9P0T7 183 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 PLAAQ9Y263 795 aa18.41■□□□□ 0.54
CLPTM1-209ENST00000588855 A0A096LPK6 155 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 OR5K3A6NET4 321 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 MYO1CO00159 1063 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 BTN3A3O00478 584 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 BTN3A1O00481 513 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 RASGRF2O14827 1237 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 ZBTB14O43829 449 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 KDM1AO60341 852 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 TCEA3O75764 348 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 CD1DP15813 335 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 MAP4P27816 1152 aaKnown RBP18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 RAB28P51157 221 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 PDX1P52945 283 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 GFERP55789 205 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 PPP1CAP62136 330 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 SQSTM1Q13501 440 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 PHKG1Q16816 387 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 TAF1BQ53T94 588 aaPredicted RBP18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 RBM44Q6ZP01 1051 aaKnown RBP18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 OOSP2Q86WS3 158 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 TDRPQ86YL5 185 aa18.4■□□□□ 0.54
CLPTM1-209ENST00000588855 DENND1AQ8TEH3 1009 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms