RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 CCDC181Q5TID7 509 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 CNGA4Q8IV77 575 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 CDKL3Q8IVW4 592 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 C19orf47Q8N9M1 422 aaKnown RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 KRT35Q92764 455 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 PTERQ96BW5 349 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 GBP5Q96PP8 586 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 SPRTNQ9H040 489 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 ICKQ9UPZ9 632 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 SLC5A6Q9Y289 635 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 EFR3BQ9Y2G0 817 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 LRBAP50851 2863 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ENO4A6NNW6 628 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 KCNN4O15554 427 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 HCRTR1O43613 425 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 STK10O94804 968 aaKnown RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 AP2A2O94973 939 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 CLDN1O95832 211 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 UGT2B7P16662 529 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 COL8A1P27658 744 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 SHMT2P34897 504 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 DCTP40126 519 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 GABRA4P48169 554 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 SOX8P57073 446 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 OTUD4Q01804 1114 aaKnown RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ZIC1Q15915 447 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 CRB2Q5IJ48 1285 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 C1orf189Q5VU69 101 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ZNF787Q6DD87 383 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 C11orf63Q6NUN7 778 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 TLDC1Q6P9B6 456 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 UNC5AQ6ZN44 842 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 TAS2R42Q7RTR8 314 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ZADH2Q8N4Q0 377 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 CLDN19Q8N6F1 224 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 LRRC45Q96CN5 670 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 DNAJC1Q96KC8 554 aaKnown RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 SPATA13Q96N96 652 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 OR2A14Q96R47 310 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 BARD1Q99728 777 aaKnown RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 TBL1YQ9BQ87 522 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ILKAPQ9H0C8 392 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 P4HTMQ9NXG6 502 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 IFT80Q9P2H3 777 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-213ENST00000587604 NDOR1Q9UHB4 597 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 SRPK3Q9UPE1 567 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 PCM1Q15154 2024 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ABCA12Q86UK0 2595 aa13.57□□□□□ -0.24
DNMT1-213ENST00000587604 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 AKR1B15C9JRZ8 316 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 LIN7AO14910 233 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 CHRM5P08912 532 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 RBP3P10745 1247 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 ACADLP28330 430 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 EIF3EP60228 445 aaKnown RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 CACNG1Q06432 222 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 ELOAQ14241 798 aaKnown RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 SPARCL1Q14515 664 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 MRPL14Q6P1L8 145 aaKnown RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 DARS2Q6PI48 645 aaKnown RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 Q6ZS92 163 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 TBC1D21Q8IYX1 336 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 FLVCR1-AS1Q8TAF5 88 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 NACC2Q96BF6 587 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 RANBP9Q96S59 729 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 OSBPL8Q9BZF1 889 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 ATP13A2Q9NQ11 1180 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 NLE1Q9NVX2 485 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 OR6C2Q9NZP2 312 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 POLG2Q9UHN1 485 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
DNMT1-213ENST00000587604 COPG1Q9Y678 874 aaKnown RBP13.56□□□□□ -0.24
DNMT1-213ENST00000587604 NUP210LQ5VU65 1888 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 A0A0J9YY10 115 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 MACROD2A1Z1Q3 448 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 QSOX1O00391 747 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 CNOT3O75175 753 aaKnown RBP13.55□□□□□ -0.24
DNMT1-213ENST00000587604 PRSS56P0CW18 603 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 CTNNA2P26232 953 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 CTNNA1P35221 906 aaKnown RBP13.55□□□□□ -0.24
DNMT1-213ENST00000587604 NSG1P42857 185 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 GLRBP48167 497 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 CYP2A13Q16696 494 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 DEFB110Q30KQ9 67 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms