RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 NPY2RP49146 381 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 ZIC1Q15915 447 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 DEFB110Q30KQ9 67 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 FAM69BQ5VUD6 431 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 SPESP1Q6UW49 350 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 C4orf22Q6V702 233 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 CDHR3Q6ZTQ4 885 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 PTRH1Q86Y79 214 aaKnown RBP17.44■□□□□ 0.38
SRSF1-208ENST00000584773 SLC22A15Q8IZD6 547 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 CARFQ8N187 725 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 C2orf73Q8N5S3 287 aaPredicted RBP17.44■□□□□ 0.38
SRSF1-208ENST00000584773 OTUD6BQ8N6M0 293 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 MAGOHBQ96A72 148 aaKnown RBP17.44■□□□□ 0.38
SRSF1-208ENST00000584773 CATSPER2Q96P56 530 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 IL17FQ96PD4 163 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 OR2A14Q96R47 310 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 KIFC1Q9BW19 673 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 P2RY12Q9H244 342 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 ACTL8Q9H568 366 aa17.44■□□□□ 0.38
SRSF1-208ENST00000584773 TSR3Q9UJK0 312 aaKnown RBP17.44■□□□□ 0.38
SRSF1-208ENST00000584773 RUVBL2Q9Y230 463 aaKnown RBP17.44■□□□□ 0.38
SRSF1-208ENST00000584773 FER1L5A0AVI2 2057 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 KRT87PA6NCN2 255 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 PRMT5O14744 637 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 GPC4O75487 556 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 VAPBO95292 243 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 MT-ND3P03897 115 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 AOAHP28039 575 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 SHMT2P34897 504 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 AARS2Q5JTZ9 985 aaKnown RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 CTSL3PQ5NE16 218 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 PTRHD1Q6GMV3 140 aaKnown RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 TAX1BP1Q86VP1 789 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 CAND1Q86VP6 1230 aaKnown RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 BPHLQ86WA6 291 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 CPT1BQ92523 772 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 MR1Q95460 341 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 FAM136AQ96C01 138 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 FCRL4Q96PJ5 515 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 FAM117AQ9C073 453 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 SLC25A18Q9H1K4 315 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 CHST8Q9H2A9 424 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 ZNF71Q9NQZ8 489 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
SRSF1-208ENST00000584773 SOX13Q9UN79 622 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 JRKLQ9Y4A0 524 aa17.43■□□□□ 0.38
SRSF1-208ENST00000584773 GOLGA8MH3BSY2 632 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 J3QKU1 62 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 ZNF185O15231 689 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 CREG1O75629 220 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 COILP38432 576 aaPredicted RBP17.42■□□□□ 0.38
SRSF1-208ENST00000584773 TTPAP49638 278 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 EIF3BP55884 814 aaKnown RBP17.42■□□□□ 0.38
SRSF1-208ENST00000584773 MC1RQ01726 317 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 GRB7Q14451 532 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 COLEC12Q5KU26 742 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 PLEKHS1Q5SXH7 462 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 C19orf47Q8N9M1 422 aaKnown RBP17.42■□□□□ 0.38
SRSF1-208ENST00000584773 PBKQ96KB5 322 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 TWSG1Q9GZX9 223 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 FANCEQ9HB96 536 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 MRM3Q9HC36 420 aaKnown RBP17.42■□□□□ 0.38
SRSF1-208ENST00000584773 LATS2Q9NRM7 1088 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 POLG2Q9UHN1 485 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 KCND3Q9UK17 655 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 KLHL20Q9Y2M5 609 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 PCDHB3Q9Y5E6 796 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 PCDHGA6Q9Y5G7 932 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 HEMK1Q9Y5R4 338 aaPredicted RBP17.42■□□□□ 0.38
SRSF1-208ENST00000584773 NFS1Q9Y697 457 aa17.42■□□□□ 0.38
SRSF1-208ENST00000584773 SEC16AO15027 2179 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-208ENST00000584773 ISM1B1AKI9 464 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 NDUFS3O75489 264 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 NR1D1P20393 614 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 PKLRP30613 574 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 FMO4P31512 558 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 PPARGP37231 505 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-208ENST00000584773 BDKRB1P46663 353 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 IL10RAQ13651 578 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 PTCHD3Q3KNS1 767 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 CCSMST1Q4G0I0 132 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 LINC01555Q8NAE3 123 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 OR8K5Q8NH50 307 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 APOBEC4Q8WW27 367 aaKnown RBP17.41■□□□□ 0.38
SRSF1-208ENST00000584773 ASZ1Q8WWH4 475 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 CLIP3Q96DZ5 547 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 OSBPL9Q96SU4 736 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 MENTQ9BUN1 341 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 ADNPQ9H2P0 1102 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 PCMTD2Q9NV79 361 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 GNPTGQ9UJJ9 305 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 NEU2Q9Y3R4 380 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 KCNMB2Q9Y691 235 aa17.41■□□□□ 0.38
SRSF1-208ENST00000584773 SPENQ96T58 3664 aaKnown RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 C21orf140B9A014 251 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms