RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 OR4K2Q8NGD2 314 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 TFGQ92734 400 aaPredicted RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 RELTQ969Z4 430 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 C19orf43Q9BQ61 176 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 FAM60AQ9NP50 221 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 POLG2Q9UHN1 485 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 TRHDEQ9UKU6 1024 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 PLCL2Q9UPR0 1127 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 A0A0J9YY10 115 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 AGAP14A8MT82 685 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 SGTAO43765 313 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 JRKO75564 520 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 KRT38O76015 456 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 ANXA9O76027 345 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 CRTAMO95727 393 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 UGT2B7P16662 529 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 INAQ16352 499 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 SLC5A12Q1EHB4 618 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 NXPE1Q8N323 547 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 P3H4Q92791 437 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 OXNAD1Q96HP4 312 aaPredicted RBP12.87□□□□□ -0.35
COPS3-218ENST00000584216 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 XKR8Q9H6D3 395 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 OR6C2Q9NZP2 312 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
COPS3-218ENST00000584216 POLEQ07864 2286 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 A0A1B0GX78 115 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
COPS3-218ENST00000584216 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 COX6B1P14854 86 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 ALAS2P22557 587 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 SLC1A1P43005 524 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 GABRA4P48169 554 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 GEMP55040 296 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 TPM4P67936 248 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 PRKG2Q13237 762 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
COPS3-218ENST00000584216 GPR33Q49SQ1 333 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
COPS3-218ENST00000584216 OVCH1Q7RTY7 1134 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 SNX20Q7Z614 316 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 TRIM73Q86UV7 250 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
COPS3-218ENST00000584216 LRRC45Q96CN5 670 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 OR2A14Q96R47 310 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 LMF1Q96S06 567 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 SEMA3GQ9NS98 782 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
COPS3-218ENST00000584216 CROCCQ5TZA2 2017 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 HACD1B0YJ81 288 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 MASP2O00187 686 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 QSOX1O00391 747 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 MBD3O95983 291 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 CHRM5P08912 532 aaPredicted RBP12.85□□□□□ -0.35
COPS3-218ENST00000584216 XIAPP98170 497 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 FANCCQ00597 558 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 MFAP5Q13361 173 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 ZIC1Q15915 447 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 RBBP7Q16576 425 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 VWA2Q5GFL6 755 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 YOD1Q5VVQ6 348 aaPredicted RBP12.85□□□□□ -0.35
COPS3-218ENST00000584216 ITPRIPL1Q6GPH6 555 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 UNC5AQ6ZN44 842 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 THOC3Q96J01 351 aaKnown RBP12.85□□□□□ -0.35
COPS3-218ENST00000584216 MAGEB10Q96LZ2 347 aaPredicted RBP12.85□□□□□ -0.35
COPS3-218ENST00000584216 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
COPS3-218ENST00000584216 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 SLC26A1Q9H2B4 701 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 ZDHHC3Q9NYG2 299 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
COPS3-218ENST00000584216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS3-218ENST00000584216 IGLV3-16A0A075B6K0 115 aa12.84□□□□□ -0.35
COPS3-218ENST00000584216 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms