RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	KRT86	O43790	486 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	OR2B3	O76000	313 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	TJP3	O95049	919 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	METTL18	O95568	372 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	HBQ1	P09105	142 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	CETN2	P41208	172 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	CSE1L	P55060	971 aa	Known RBP	14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	CACNG1	Q06432	222 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	RPA4	Q13156	261 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	ZIC1	Q15915	447 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	SKOR2	Q2VWA4	1001 aa	Predicted RBP	14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	SYTL3	Q4VX76	610 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	UNC5A	Q6ZN44	842 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	MRGPRE	Q86SM8	312 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	FAM71D	Q8N9W8	422 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	GLIS1	Q8NBF1	620 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	PRR7	Q8TB68	274 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	PNPLA2	Q96AD5	504 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	C19orf60	Q96EN9	201 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	CDKN2AIPNL	Q96HQ2	116 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	ALS2CR12	Q96Q35	445 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	DPH2	Q9BQC3	489 aa	Predicted RBP	14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	SLC29A3	Q9BZD2	475 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	LRRC40	Q9H9A6	602 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	ARNT2	Q9HBZ2	717 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	IMPACT	Q9P2X3	320 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	DHCR7	Q9UBM7	475 aa	Known RBP	14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	NDOR1	Q9UHB4	597 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	CDYL	Q9Y232	598 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	NUP210L	Q5VU65	1888 aa		14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732	USP9Y	O00507	2555 aa	Predicted RBP	14.63	□□□□□ -0.07
SREBF1-222	ENST00000583732		A0A0J9YY10	115 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732		H7C0S8	307 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	LIN7A	O14910	233 aa	Predicted RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	AP2A2	O94973	939 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	CHRM5	P08912	532 aa	Predicted RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	MSN	P26038	577 aa	Known RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	SHMT2	P34897	504 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	FOLR3	P41439	243 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	CCDC38	Q502W7	563 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	KCTD11	Q693B1	232 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	TMEM151B	Q8IW70	566 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	FAM20C	Q8IXL6	584 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	ZNF655	Q8N720	491 aa	Predicted RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	STYX	Q8WUJ0	223 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	14.62	□□□□□ -0.07	1e-6	■□□□□ 10.8
SREBF1-222	ENST00000583732	OR2A14	Q96R47	310 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	SMAD5	Q99717	465 aa	Known RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	DHRS4	Q9BTZ2	278 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	TXLNG	Q9NUQ3	528 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	IFT80	Q9P2H3	777 aa	Predicted RBP	14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	ICE1	Q9Y2F5	2266 aa		14.62	□□□□□ -0.07
SREBF1-222	ENST00000583732	ISM1	B1AKI9	464 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	PEX12	O00623	359 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	KLF7	O75840	302 aa	Predicted RBP	14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	FTH1	P02794	183 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	TPBGL	P0DKB5	382 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	NSG1	P42857	185 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	GDF10	P55107	478 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	NR6A1	Q15406	480 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	PARP6	Q2NL67	630 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	VWA5B1	Q5TIE3	1220 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	HPS6	Q86YV9	775 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	TMTC1	Q8IUR5	882 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	KLHDC8B	Q8IXV7	354 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	ACRBP	Q8NEB7	543 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	TCTN2	Q96GX1	697 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	GBP5	Q96PP8	586 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	C19orf43	Q9BQ61	176 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	CIDEB	Q9UHD4	219 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	PACSIN2	Q9UNF0	486 aa	Predicted RBP	14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	KLHL20	Q9Y2M5	609 aa		14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	REXO2	Q9Y3B8	237 aa	Known RBP	14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	EPN1	Q9Y6I3	576 aa	Predicted RBP	14.61	□□□□□ -0.07
SREBF1-222	ENST00000583732	ESPL1	Q14674	2120 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	CCDC162P	A2VCL2	907 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GRID2IP	A4D2P6	1211 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GOLGA6L9	A6NEM1	432 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	ZSCAN9	O15535	394 aa	Predicted RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	CNOT3	O75175	753 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	IPO7	O95373	1038 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GSTM1	P09488	218 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	PEBP1	P30086	187 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	FOXN2	P32314	431 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GABRA4	P48169	554 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	DCD	P81605	110 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GSTM4	Q03013	218 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	ITIH4	Q14624	930 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	SSPN	Q14714	243 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	PLEKHN1	Q494U1	663 aa	Predicted RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	RHBDD2	Q6NTF9	364 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	TAX1BP1	Q86VP1	789 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	TBC1D21	Q8IYX1	336 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	GALNT16	Q8N428	558 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	CISD2	Q8N5K1	135 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	LMNTD1	Q8N9Z9	388 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	CLEC1A	Q8NC01	280 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	OR52K1	Q8NGK4	314 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	FLVCR1-AS1	Q8TAF5	88 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	FER1L6-AS2	Q96M78	137 aa		14.6	□□□□□ -0.07

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms