RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ANKRD20A4Q4UJ75 823 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 ZNF501Q96CX3 271 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-220ENST00000581707 SERPINB12Q96P63 405 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 SEMA4CQ9C0C4 833 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 KCND1Q9NSA2 647 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 OR6C2Q9NZP2 312 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 PADI1Q9ULC6 663 aa18.89■□□□□ 0.61
SREBF1-220ENST00000581707 SPTBP11277 2137 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 COL6A6A6NMZ7 2263 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 NKX2-8O15522 239 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 NTRK1P04629 796 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 RPN2P04844 631 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 CHRM5P08912 532 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-220ENST00000581707 DLSTP36957 453 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 GNG11P61952 73 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 DHX34Q14147 1143 aaKnown RBP18.88■□□□□ 0.61
SREBF1-220ENST00000581707 TYSND1Q2T9J0 566 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 RNF187Q5TA31 235 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-220ENST00000581707 NEPROQ6NW34 567 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 SPESP1Q6UW49 350 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 OTOAQ7RTW8 1153 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 HOOK3Q86VS8 718 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 PPIL6Q8IXY8 311 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 ZNF843Q8N446 348 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 NAT8LQ8N9F0 302 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 EXD3Q8N9H8 876 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 GSDMBQ8TAX9 411 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 MED8Q96G25 268 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 BIRC8Q96P09 236 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 TRAPPC9Q96Q05 1148 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 TRIM56Q9BRZ2 755 aaKnown RBP18.88■□□□□ 0.61
SREBF1-220ENST00000581707 DDX47Q9H0S4 455 aaKnown RBP18.88■□□□□ 0.61
SREBF1-220ENST00000581707 FANCEQ9HB96 536 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 SYTL2Q9HCH5 934 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 CROTQ9UKG9 612 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 PLAGL1Q9UM63 463 aa18.88■□□□□ 0.61
SREBF1-220ENST00000581707 PVRP15151 417 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 OGNP20774 298 aaKnown RBP18.87■□□□□ 0.61
SREBF1-220ENST00000581707 F8A1P23610 371 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 FMO4P31512 558 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 MC1RQ01726 317 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 UNC5DQ6UXZ4 953 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 TMEM126BQ8IUX1 230 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 STARD8Q92502 1023 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 LPGAT1Q92604 370 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 ZNF669Q96BR6 464 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-220ENST00000581707 CATSPER2Q96P56 530 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 OR2A14Q96R47 310 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 KLHL25Q9H0H3 589 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 LATS2Q9NRM7 1088 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 SPHK1Q9NYA1 384 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 PYCARDQ9ULZ3 195 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 CRYL1Q9Y2S2 319 aa18.87■□□□□ 0.61
SREBF1-220ENST00000581707 H3BMM5 538 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 SCRG1O75711 98 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 ESR1P03372 595 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 PRKAR1AP10644 381 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 UGT2B7P16662 529 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 TCN2P20062 427 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 MAGEA3P43357 314 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 ADARP55265 1226 aaKnown RBP18.86■□□□□ 0.61
SREBF1-220ENST00000581707 KYNUQ16719 465 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 CTSL3PQ5NE16 218 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 PLEKHS1Q5SXH7 462 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 RNASEH2BQ5TBB1 312 aaKnown RBP18.86■□□□□ 0.61
SREBF1-220ENST00000581707 PAPD7Q5XG87 772 aaKnown RBP18.86■□□□□ 0.61
SREBF1-220ENST00000581707 TMEM135Q86UB9 458 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 CILP2Q8IUL8 1156 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 CAPZA3Q96KX2 299 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 LHX9Q9NQ69 397 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 IL1RAPL1Q9NZN1 696 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 ASIC3Q9UHC3 531 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 PCYOX1Q9UHG3 505 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 KCND3Q9UK17 655 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 VPS9D1Q9Y2B5 631 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 MRPS18BQ9Y676 258 aaKnown RBP18.86■□□□□ 0.61
SREBF1-220ENST00000581707 MAD1L1Q9Y6D9 718 aa18.86■□□□□ 0.61
SREBF1-220ENST00000581707 ISM1B1AKI9 464 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 TMEM150CB9EJG8 249 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 TERTO14746 1132 aaKnown RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 CPNE3O75131 537 aaKnown RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 KATNA1O75449 491 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 FAM87AP0C7U9 286 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 MSL3P1P0C860 447 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 RAB28P51157 221 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 CDC20Q12834 499 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 THOC5Q13769 683 aaKnown RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 CRTC2Q53ET0 693 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 BORAQ6PGQ7 559 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 CENPUQ71F23 418 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 TRIM73Q86UV7 250 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 DCUN1D3Q8IWE4 304 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 AGGF1Q8N302 714 aaeCLIP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 FLVCR1-AS1Q8TAF5 88 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 SKA2Q8WVK7 121 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 SLCO2A1Q92959 643 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 SIGLEC10Q96LC7 697 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 NAPGQ99747 312 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 TWSG1Q9GZX9 223 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms