RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 AKIRIN1Q9H9L7 192 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 HOMER3Q9NSC5 361 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 PCMTD2Q9NV79 361 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 TLK1Q9UKI8 766 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 TCFL5Q9UL49 500 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ZNF148Q9UQR1 794 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ASF1AQ9Y294 204 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 TCAF1Q9Y4C2 921 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 PCM1Q15154 2024 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ESPL1Q14674 2120 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 E7EQ34 232 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 CCL22O00626 93 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 KPNA5O15131 536 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 KLHL41O60662 606 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 SLCO2B1O94956 709 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ONECUT2O95948 504 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 CYP2A7P20853 494 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 VARSP26640 1264 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 GABRA4P48169 554 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 TTPAP49638 278 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ABRQ12979 859 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 RHBDD2Q6NTF9 364 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 TLDC1Q6P9B6 456 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 UNC5DQ6UXZ4 953 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 UNC5AQ6ZN44 842 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ASB18Q6ZVZ8 466 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 PTRH1Q86Y79 214 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 GPR135Q8IZ08 494 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 TEX19Q8NA77 164 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 GLIS1Q8NBF1 620 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 OR1L3Q8NH93 324 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ELMO1Q92556 727 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 HDAC10Q969S8 669 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 OR2A14Q96R47 310 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 DESI2Q9BSY9 194 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 TLR10Q9BXR5 811 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 AP1M1Q9BXS5 423 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF71Q9NQZ8 489 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 SRPK3Q9UPE1 567 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 ICKQ9UPZ9 632 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 PADI2Q9Y2J8 665 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.17
SMARCE1-216ENST00000580419 HIVEP3Q5T1R4 2406 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 A0A0J9YY10 115 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 TMEM150CB9EJG8 249 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 E7EVH7 732 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 ZIC2O95409 532 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CHRM5P08912 532 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 AGXTP21549 392 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 RAB28P51157 221 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 RRADP55042 308 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 NCF4Q15080 339 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 KYNUQ16719 465 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 PCID2Q5JVF3 399 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 FAM199XQ6PEV8 388 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 FAM198BQ6UWH4 519 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 PPP1R21Q6ZMI0 780 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CDHR3Q6ZTQ4 885 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF534Q76KX8 674 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 HOOK3Q86VS8 718 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 SYTL1Q8IYJ3 562 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CCDC89Q8N998 374 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 C19orf47Q8N9M1 422 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 PHC3Q8NDX5 983 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 ATG4AQ8WYN0 398 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 MIB2Q96AX9 1013 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CLIP3Q96DZ5 547 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 PPM1MQ96MI6 270 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 RAB11FIP5Q9BXF6 653 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 ING2Q9H160 280 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 MRM3Q9HC36 420 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 RAB6BQ9NRW1 208 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 TREX1Q9NSU2 369 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 FAM8A1Q9UBU6 413 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 SNX7Q9UNH6 387 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 PRSS21Q9Y6M0 314 aa14.01□□□□□ -0.17
SMARCE1-216ENST00000580419 CCDC78A2IDD5 438 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 C9J4A7 227 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 PRMT5O14744 637 aaPredicted RBP14□□□□□ -0.17
SMARCE1-216ENST00000580419 S1PR4O95977 384 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 GOT2P00505 430 aaKnown RBP14□□□□□ -0.17
SMARCE1-216ENST00000580419 APOA4P06727 396 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 APRTP07741 180 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 PRSS56P0CW18 603 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 UGT2B7P16662 529 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.17
SMARCE1-216ENST00000580419 NPY2RP49146 381 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 PGDP52209 483 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 SOX8P57073 446 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 PRAMEP78395 509 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 IL10RAQ13651 578 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 SIX1Q15475 284 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms