RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 VRK3Q8IV63 474 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 LMNTD2Q8IXW0 634 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 PDIK1LQ8N165 341 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 C17orf53Q8N3J3 647 aaPredicted RBP10.57□□□□□ -0.72
NDEL1-208ENST00000580237 SNF8Q96H20 258 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 PPM1MQ96MI6 270 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 SLC7A5P2Q9GIP4 190 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 KLHL25Q9H0H3 589 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 C1GALT1Q9NS00 363 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 INTS10Q9NVR2 710 aaKnown RBP10.57□□□□□ -0.72
NDEL1-208ENST00000580237 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 PILRAQ9UKJ1 303 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 SLC39A10Q9ULF5 831 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 TMEM184BQ9Y519 407 aaPredicted RBP10.57□□□□□ -0.72
NDEL1-208ENST00000580237 MRFAP1Q9Y605 127 aa10.57□□□□□ -0.72
NDEL1-208ENST00000580237 EFCAB8A8MWE9 144 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 ISM1B1AKI9 464 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 ERVH48-1M5A8F1 160 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 NDC80O14777 642 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TTI1O43156 1089 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 MT-ND3P03897 115 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 CHRM5P08912 532 aaPredicted RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 FGF5P12034 268 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PKMP14618 531 aaKnown RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 LIFP15018 202 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PVRP15151 417 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 FOLR1P15328 257 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 UGT2B7P16662 529 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PRDX3P30048 256 aaKnown RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PTGIRP43119 386 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 BDKRB1P46663 353 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 RAB28P51157 221 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TUBB4BP68371 445 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 DHX9Q08211 1270 aaKnown RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TUBB2AQ13885 445 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 CRYMQ14894 314 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 GPR19Q15760 415 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 HIF1AQ16665 826 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TTLL9Q3SXZ7 439 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PLEKHS1Q5SXH7 462 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 SPESP1Q6UW49 350 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 C6orf15Q6UXA7 325 aaPredicted RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 UNC5AQ6ZN44 842 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TRIM73Q86UV7 250 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TAX1BP1Q86VP1 789 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 KCNMB4Q86W47 210 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 DENND6AQ8IWF6 608 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 UNC5BQ8IZJ1 945 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 D2HGDHQ8N465 521 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 ZBTB2Q8N680 514 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 GALNT6Q8NCL4 622 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 CFAP36Q96G28 342 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 KRT12Q99456 494 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 NRTNQ99748 197 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 NAT9Q9BTE0 207 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 EFHD1Q9BUP0 239 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 TUBB2BQ9BVA1 445 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 RAB11FIP5Q9BXF6 653 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 PPANQ9NQ55 473 aaKnown RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 FBXO6Q9NRD1 293 aaPredicted RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 IRAK4Q9NWZ3 460 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 OR6C2Q9NZP2 312 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 CIDEBQ9UHD4 219 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 CHMP2BQ9UQN3 213 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 RUVBL2Q9Y230 463 aaKnown RBP10.56□□□□□ -0.72
NDEL1-208ENST00000580237 BTRCQ9Y297 605 aa10.56□□□□□ -0.72
NDEL1-208ENST00000580237 ZCWPW2A0A1B0GU75 182 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ZNF891A8MT65 544 aaPredicted RBP10.55□□□□□ -0.72
NDEL1-208ENST00000580237 TMEM150CB9EJG8 249 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SMAPO00193 183 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ATXN7O15265 892 aaPredicted RBP10.55□□□□□ -0.72
NDEL1-208ENST00000580237 CPNE3O75131 537 aaKnown RBP10.55□□□□□ -0.72
NDEL1-208ENST00000580237 GPC4O75487 556 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 BANF1O75531 89 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SPAG6O75602 509 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SCRG1O75711 98 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SLCO2B1O94956 709 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 TTC4O95801 387 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 DLGAP3O95886 979 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 F7P08709 466 aaPredicted RBP10.55□□□□□ -0.72
NDEL1-208ENST00000580237 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ST6GAL1P15907 406 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ZNF28P17035 718 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 CYP2A7P20853 494 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 PKLRP30613 574 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 DLSTP36957 453 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 STAT5AP42229 794 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ADARP55265 1226 aaKnown RBP10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ARL4CP56559 192 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 MPP1Q00013 466 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 ABHD18Q0P651 414 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 CTBP1Q13363 440 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 MAP7Q14244 749 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 HSP90AA5PQ58FG0 334 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SPANXN3Q5MJ09 141 aa10.55□□□□□ -0.72
NDEL1-208ENST00000580237 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms