RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 RAPGEF5Q92565 580 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 LMF1Q96S06 567 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TRIM56Q9BRZ2 755 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SPRTNQ9H040 489 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NAT10Q9H0A0 1025 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 KLHL25Q9H0H3 589 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 IRAK4Q9NWZ3 460 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 DHCR7Q9UBM7 475 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CDC23Q9UJX2 597 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NXT1Q9UKK6 140 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CACNA1CQ13936 2221 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 KDM1AO60341 852 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CNOT3O75175 753 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SRP72O76094 671 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 GSTM1P09488 218 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PTPN3P26045 913 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SSTR2P30874 369 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 GABRA4P48169 554 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ARSFP54793 590 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 GSTM4Q03013 218 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 MPP3Q13368 585 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TUBB8Q3ZCM7 444 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ODF2Q5BJF6 829 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 MRGPRGQ86SM5 289 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 DAAM2Q86T65 1068 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SLC25A41Q8N5S1 370 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ZNF655Q8N720 491 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 VAT1Q99536 393 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 COPS8Q99627 209 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 FSD1LQ9BXM9 530 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 OR52A5Q9H2C5 316 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 FAM60AQ9NP50 221 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PLCL2Q9UPR0 1127 aa11.76□□□□□ -0.53
CDK5RAP3-216ENST00000579853 A0A087X0T9 212 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 A0A0J9YY10 115 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 DYTNA2CJ06 578 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 C5orf60A6NFR6 353 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 AGAP14A8MT82 685 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 MASP2O00187 686 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PCDH17O14917 1159 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ONECUT2O95948 504 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 H2AFZP0C0S5 128 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 FAM228BP0C875 321 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ATP1B2P14415 290 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 UGT2B7P16662 529 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NFKB1P19838 968 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ALAS2P22557 587 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SHMT2P34897 504 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CHRNA4P43681 627 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 MFAP5Q13361 173 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 BOP1Q14137 746 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NOMO1Q15155 1222 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 DEFB110Q30KQ9 67 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ZNF324BQ6AW86 544 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SPNS3Q6ZMD2 512 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 H2AFVQ71UI9 128 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 OVCH1Q7RTY7 1134 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 LILRA3Q8N6C8 439 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 OR1N1Q8NGS0 311 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TFB1MQ8WVM0 346 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CTNNBL1Q8WYA6 563 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NR4A3Q92570 626 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TFGQ92734 400 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 IQCDQ96DY2 449 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 MRGPRX2Q96LB1 330 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 FCRL5Q96RD9 977 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 C19orf43Q9BQ61 176 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 COG4Q9H9E3 785 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SEMA3GQ9NS98 782 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 OR6C2Q9NZP2 312 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 POLG2Q9UHN1 485 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SNRNP200O75643 2136 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TRAV17A0A0B4J275 112 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TRGV8A0A0C4DH27 118 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 A0A1B0GX78 115 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SOCS6O14544 535 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SGTAO43765 313 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 AGAP20933 346 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CD68P34810 354 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 RBPJQ06330 500 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PRKG2Q13237 762 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TAF1AQ15573 450 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 RBBP7Q16576 425 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 YOD1Q5VVQ6 348 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 KIRREL2Q6UWL6 708 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TMEM207Q6UWW9 146 aa11.74□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms