RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PRORYQ9H606 182 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 XKR8Q9H6D3 395 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 LATS2Q9NRM7 1088 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 SIDT1Q9NXL6 827 aaKnown RBP21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 FOXJ2Q9P0K8 574 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 SEMA5BQ9P283 1151 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 ACSL6Q9UKU0 697 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 ICKQ9UPZ9 632 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 PCDHGA3Q9Y5H0 932 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 COMMD10Q9Y6G5 202 aa21.54■■□□□ 1.04
SMARCD2-206ENST00000577990 BTN3A3O00478 584 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 KDM1AO60341 852 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 HAUS5O94927 633 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 ATP5DP30049 168 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 SHMT2P34897 504 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 COL9A2Q14055 689 aaPredicted RBP21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 FRG1Q14331 258 aaKnown RBP21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 GBX1Q14549 363 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 CNSTQ6PJW8 725 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 KIAA0408Q6ZU52 694 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 DCUN1D3Q8IWE4 304 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 ZBED8Q8IZ13 594 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 KIF18AQ8NI77 898 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 KCNE4Q8WWG9 221 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 KCNJ9Q92806 393 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 PMEPA1Q969W9 287 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 MAP3K3Q99759 626 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 PPANQ9NQ55 473 aaKnown RBP21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 GALPQ9UBC7 116 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 POMT2Q9UKY4 750 aa21.53■■□□□ 1.04
SMARCD2-206ENST00000577990 IGHV5-51A0A0C4DH38 117 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 GSAPA4D1B5 854 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 BTN3A1O00481 513 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 CD82P27701 267 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 CARSP49589 748 aaKnown RBP21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 CLCN7P51798 805 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 KPNA2P52292 529 aaKnown RBP21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 CAV1Q03135 178 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 TRMT10BQ6PF06 316 aaKnown RBP21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 MNS1Q8NEH6 495 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 SKA2Q8WVK7 121 aaPredicted RBP21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 ASPSCR1Q9BZE9 553 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 FBXO8Q9NRD0 319 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 PLAGL1Q9UM63 463 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 B3GALT1Q9Y5Z6 326 aa21.52■■□□□ 1.04
SMARCD2-206ENST00000577990 EIF3HO15372 352 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 TPBGLP0DKB5 382 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 NELFEP18615 380 aaKnown RBP21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 PLTPP55058 493 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 TTLL9Q3SXZ7 439 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 DCAF12Q5T6F0 453 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 TEDDM1Q5T9Z0 273 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 ANKS6Q68DC2 871 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 CEACAM20Q6UY09 585 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 GALNT7Q86SF2 657 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 KMT5CQ86Y97 462 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 ADGRF3Q8IZF5 1079 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 CARFQ8N187 725 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 SLC41A2Q96JW4 573 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 FOPNLQ96NB1 174 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 TEFMQ96QE5 360 aaKnown RBP21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 AARSD1Q9BTE6 412 aaKnown RBP21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 LRRC1Q9BTT6 524 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 SAYSD1Q9NPB0 183 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 KLHL42Q9P2K6 505 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 SLC17A6Q9P2U8 582 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 MED16Q9Y2X0 877 aa21.51■■□□□ 1.03
SMARCD2-206ENST00000577990 C2orf74A8MZ97 194 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 GABRB3P28472 473 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 CXADRP78310 365 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 SH3BP2P78314 561 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 SLC7A5Q01650 507 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 KYNUQ16719 465 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 ACSBG2Q5FVE4 666 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 MMGT1Q8N4V1 131 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 SIDT2Q8NBJ9 832 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 GIMAP7Q8NHV1 300 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 PYROXD1Q8WU10 500 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 SLC30A3Q99726 388 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 CTRCQ99895 268 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 DPH1Q9BZG8 443 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 ACTR10Q9NZ32 417 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 OR6C2Q9NZP2 312 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 TSR3Q9UJK0 312 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 RUVBL2Q9Y230 463 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 PCDHB11Q9Y5F2 797 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 NFS1Q9Y697 457 aa21.5■■□□□ 1.03
SMARCD2-206ENST00000577990 GCN1Q92616 2671 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 CTAGE15A4D2H0 777 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 POLR1CO15160 346 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 AHSGP02765 367 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 CTAGE8P0CG41 777 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 CDH3P22223 829 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 PRDX3P30048 256 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 PKLRP30613 574 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 ARL4DP49703 201 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 RAB28P51157 221 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 FOXM1Q08050 763 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 MGAT5Q09328 741 aa21.49■■□□□ 1.03
SMARCD2-206ENST00000577990 TRADDQ15628 312 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms