RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CD1DP15813 335 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 SLCO1A2P46721 670 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 GPLD1P80108 840 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 DAB2P98082 770 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 CLPPQ16740 277 aaPredicted RBP12.35□□□□□ -0.43
MKS1-206ENST00000577824 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 ADAMTSL2Q86TH1 951 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 TBC1D1Q86TI0 1168 aaPredicted RBP12.35□□□□□ -0.43
MKS1-206ENST00000577824 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 OR52E1Q8NGJ3 308 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 RHEBL1Q8TAI7 183 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 GPR78Q96P69 363 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 HGH1Q9BTY7 390 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 RDH14Q9HBH5 336 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 IGSF5Q9NSI5 407 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 MKS1Q9NXB0 559 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 TBK1Q9UHD2 729 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 ADAMTS6Q9UKP5 1117 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 IKZF3Q9UKT9 509 aa12.35□□□□□ -0.43
MKS1-206ENST00000577824 IGHV1OR21-1A0A087WYE8 117 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 RHPN2P1A8MT19 583 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 BTN3A1O00481 513 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 RFPL3O75679 317 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 KLHL2O95198 593 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 CDK4P11802 303 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 MYF5P13349 255 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 CYP2A7P20853 494 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 PKLRP30613 574 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 BDKRB1P46663 353 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 CAPZBP47756 277 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 AP1S2P56377 157 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 CDKL1Q00532 357 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 IRF9Q00978 393 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 ABRQ12979 859 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 TRIP6Q15654 476 aaKnown RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 UBE2R2Q712K3 238 aaPredicted RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 TRABD2AQ86V40 505 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 DEFB124Q8NES8 71 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 WDR48Q8TAF3 677 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 DENND1AQ8TEH3 1009 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 SKA2Q8WVK7 121 aaPredicted RBP12.34□□□□□ -0.43
MKS1-206ENST00000577824 KIAA1191Q96A73 305 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 RAD51AP1Q96B01 352 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 PGM2Q96G03 612 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 FERD3LQ96RJ6 166 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 CCDC3Q9BQI4 270 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 RAB11FIP5Q9BXF6 653 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 RAB33BQ9H082 229 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 PARVBQ9HBI1 364 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 ICKQ9UPZ9 632 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 OARD1Q9Y530 152 aa12.34□□□□□ -0.43
MKS1-206ENST00000577824 TRBV23OR9-2A0A075B6M9 112 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 SMIM23A6NLE4 172 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ZW10O43264 779 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ZBTB14O43829 449 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 KERAO60938 352 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 UBXN7O94888 489 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 SHMT2P34897 504 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 RAB28P51157 221 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 SLC18A2Q05940 514 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 CSHL1Q14406 222 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ACAP2Q15057 778 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 CYP2A13Q16696 494 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 PHKG1Q16816 387 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 RSPO4Q2I0M5 234 aaPredicted RBP12.33□□□□□ -0.44
MKS1-206ENST00000577824 CCSMST1Q4G0I0 132 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 TECRLQ5HYJ1 363 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 CDKL4Q5MAI5 379 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 TTC23LQ6PF05 361 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ISCA2Q86U28 154 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 PTERQ96BW5 349 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 ATOH8Q96SQ7 321 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 SLC38A3Q99624 504 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 OR6C2Q9NZP2 312 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 SENP1Q9P0U3 644 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 EPHA6Q9UF33 1036 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
MKS1-206ENST00000577824 MN1Q10571 1320 aaPredicted RBP12.33□□□□□ -0.44
MKS1-206ENST00000577824 A0A1W2PPM1 405 aa12.32□□□□□ -0.44
MKS1-206ENST00000577824 A0A1W2PQM1 296 aa12.32□□□□□ -0.44
MKS1-206ENST00000577824 CPED1A4D0V7 1026 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms