RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PVRP15151 417 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 NSG1P42857 185 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 EIF3EP60228 445 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 CACNG1Q06432 222 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 PRKG2Q13237 762 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 ARHGEF18Q6ZSZ5 1173 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 SERPINA9Q86WD7 417 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 ADGRF3Q8IZF5 1079 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 LILRA3Q8N6C8 439 aaPredicted RBP13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 PHC3Q8NDX5 983 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 ACTL9Q8TC94 416 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 ARNT2Q9HBZ2 717 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 INTS7Q9NVH2 962 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 P4HTMQ9NXG6 502 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 PLCL2Q9UPR0 1127 aa13.73□□□□□ -0.21
SMARCD2-205ENST00000577686 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 GOLGA6L9A6NEM1 432 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 H7C0S8 307 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 PSMD3O43242 534 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 TJP3O95049 919 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 OR56A5P0C7T3 313 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 UGT2B7P16662 529 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ITGAXP20702 1163 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ARSFP54793 590 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 AIMP2Q13155 320 aaKnown RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ITIH4Q14624 930 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 KIR2DS3Q14952 304 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 NKAIN1Q4KMZ8 207 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ZNF385CQ66K41 422 aaPredicted RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 HIST2H2BCQ6DN03 193 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 STYXQ8WUJ0 223 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 FKBP10Q96AY3 582 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 SLC22A18Q96BI1 424 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 GBP5Q96PP8 586 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 LRRC40Q9H9A6 602 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ASF1BQ9NVP2 202 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 SMARCAL1Q9NZC9 954 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
SMARCD2-205ENST00000577686 RP1L1Q8IWN7 2480 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 CCDC78A2IDD5 438 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 ISM1B1AKI9 464 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 PJA2O43164 708 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 KLF7O75840 302 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 CBX6O95503 412 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 AP2A1O95782 977 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 LDLRP01130 860 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 CHRM5P08912 532 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 CBSLP0DN79 551 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 ITGA3P26006 1051 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 PTPN7P35236 360 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 CBSP35520 551 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 GLRBP48167 497 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 SOX8P57073 446 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 P3H1Q32P28 736 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 FAM69BQ5VUD6 431 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 SLC34A3Q8N130 599 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 NAT14Q8WUY8 206 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 ELMO1Q92556 727 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 DNAJC1Q96KC8 554 aaKnown RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 ERRFI1Q9UJM3 462 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 TDRKHQ9Y2W6 561 aaKnown RBP13.71□□□□□ -0.21
SMARCD2-205ENST00000577686 UNC79Q9P2D8 2635 aa13.71□□□□□ -0.22
SMARCD2-205ENST00000577686 TNRC6AQ8NDV7 1962 aaKnown RBP13.71□□□□□ -0.22
SMARCD2-205ENST00000577686 TEX15Q9BXT5 2789 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 WIPF3A6NGB9 483 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 AGPSO00116 658 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 KRT86O43790 486 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 PDHA2P29803 388 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 RWDD2BP57060 319 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 NAA30Q147X3 362 aaPredicted RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 DEFB110Q30KQ9 67 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 DNAJC21Q5F1R6 531 aaKnown RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 ZC3H12BQ5HYM0 836 aaKnown RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 PACS1Q6VY07 963 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 UNC5AQ6ZN44 842 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 Q6ZS92 163 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 LINC00523Q86TU6 105 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 TRIM73Q86UV7 250 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms