RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CARD9Q9H257 536 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 GOLPH3Q9H4A6 298 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 DEF6Q9H4E7 631 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 C10orf88Q9H8K7 445 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 RMI1Q9H9A7 625 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 GPN2Q9H9Y4 310 aaPredicted RBP6.11□□□□□ -1.43
NUP88-212ENST00000576708 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 TRIM39Q9HCM9 518 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 ZNF71Q9NQZ8 489 aaPredicted RBP6.11□□□□□ -1.43
NUP88-212ENST00000576708 GEMIN8Q9NWZ8 242 aaKnown RBP6.11□□□□□ -1.43
NUP88-212ENST00000576708 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 DNPEPQ9ULA0 475 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 TFR2Q9UP52 801 aa6.11□□□□□ -1.43
NUP88-212ENST00000576708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.11□□□□□ -1.43
NUP88-212ENST00000576708 ZFC3H1O60293 1989 aaKnown RBP6.11□□□□□ -1.43
NUP88-212ENST00000576708 BSNQ9UPA5 3926 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KIR2DS5A0A0G2JLQ3 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 A0A0G2JNG1 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 ZNF503-AS2A6NEH8 195 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 OR52A4PA6NMU1 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 ZNF891A8MT65 544 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 PDZK1P1A8MUH7 402 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KIR2DS3K7RE56 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 CHUKO15111 745 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 POLR1CO15160 346 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 ARHGAP6O43182 974 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 NPHS1O60500 1241 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A9O60656 530 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PPFIA2O75334 1257 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 NDST3O95803 873 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 VIPP01282 170 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 ZNF7P17097 686 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 JUNBP17275 347 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 AMD1P17707 334 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A6P19224 532 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 COMTP21964 271 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A1P22309 533 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A4P22310 534 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PTPN3P26045 913 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 CSRP3P50461 194 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 CLCNKAP51800 687 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PPP1CAP62136 330 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 SUMO1P63165 101 aaKnown RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 TLE1Q04724 770 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 FOXM1Q08050 763 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 WASHC5Q12768 1159 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KCNAB2Q13303 367 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PTPRCAPQ14761 206 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KIR2DS5Q14953 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PDK1Q15118 436 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 IGFBP7Q16270 282 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 ATP13A5Q4VNC0 1218 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TEX44Q53QW1 395 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KAZNQ674X7 775 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KDELC1Q6UW63 502 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 CEACAM20Q6UY09 585 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 FAM83HQ6ZRV2 1179 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 FAM92BQ6ZTR7 304 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TMEM26Q6ZUK4 368 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 MICALCLQ6ZW33 695 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 C11orf96Q7Z7L8 435 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TMEM135Q86UB9 458 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 LRRTM4Q86VH4 590 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 PHYKPLQ8IUZ5 450 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TRIM48Q8IWZ4 208 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 RAVER1Q8IY67 606 aaKnown RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 TTC30BQ8N4P2 665 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 OR8K1Q8NGG5 319 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 RSC1A1Q92681 617 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KISS1RQ969F8 398 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 SH3KBP1Q96B97 665 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 HAUS1Q96CS2 278 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 IQCDQ96DY2 449 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 SLC45A3Q96JT2 553 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 C9orf72Q96LT7 481 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 STN1Q9H668 368 aaKnown RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 NHEJ1Q9H9Q4 299 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A7Q9HAW7 530 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A10Q9HAW8 530 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A8Q9HAW9 530 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 MAGEE1Q9HCI5 957 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 FBXO8Q9NRD0 319 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 HAUS2Q9NVX0 235 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 SIDT1Q9NXL6 827 aaKnown RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 WDR37Q9Y2I8 494 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TRAF6Q9Y4K3 522 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 TMEM184BQ9Y519 407 aaPredicted RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 ASH1LQ9NR48 2969 aaKnown RBP6.1□□□□□ -1.43
NUP88-212ENST00000576708 COL6A6A6NMZ7 2263 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 AHCTF1Q8WYP5 2266 aa6.1□□□□□ -1.43
NUP88-212ENST00000576708 MN1Q10571 1320 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 BOD1L1Q8NFC6 3051 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 A0A0A6YYK5 440 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 LILRA5A6NI73 299 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 OR5K4A6NMS3 321 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ZNF487B1APH4 448 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 K7EM74 188 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms