RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 ZNF749O43361 778 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 SUN1O94901 812 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 CHRM5P08912 532 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 OR56A5P0C7T3 313 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 STIP1P31948 543 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 CCL11P51671 97 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 SYTL3Q4VX76 610 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 CCDC38Q502W7 563 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 FAM69BQ5VUD6 431 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 LYPLAL1Q5VWZ2 237 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 AFTPHQ6ULP2 937 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 UNC5AQ6ZN44 842 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 TRIM73Q86UV7 250 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 HOOK3Q86VS8 718 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 GPR135Q8IZ08 494 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 DNAAF3Q8N9W5 541 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 FLVCR1-AS1Q8TAF5 88 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 TCTN2Q96GX1 697 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 OR2A14Q96R47 310 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 RANBP9Q96S59 729 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 DHRS4Q9BTZ2 278 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 FRMD8P1Q9BZ68 369 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 FAM60AQ9NP50 221 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 PADI2Q9Y2J8 665 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 SEC16AO15027 2179 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 COL12A1Q99715 3063 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 MAST4O15021 2626 aa18.69■□□□□ 0.58
HCFC1R1-204ENST00000573095 A0A0J9YY10 115 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 BHMG1C9JSJ3 638 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 SORBS2O94875 1100 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 GAS8O95995 478 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 AGXTP21549 392 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 FDFT1P37268 417 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 GABRA4P48169 554 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 ACVR1Q04771 509 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 ZBTB2Q8N680 514 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 TMEM102Q8N9M5 508 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 C17orf62Q9BQA9 187 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 ETNK1Q9HBU6 452 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 ZNF451Q9Y4E5 1061 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 AP1M2Q9Y6Q5 423 aa18.68■□□□□ 0.58
HCFC1R1-204ENST00000573095 NUP210LQ5VU65 1888 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 TTLL8A6PVC2 850 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 F8W8V4 182 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 LIASO43766 372 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 KDM1AO60341 852 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 TPBGLP0DKB5 382 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 RRADP55042 308 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 BRD3Q15059 726 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 ZIC1Q15915 447 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 DEFB110Q30KQ9 67 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 NADK2Q4G0N4 442 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 TSTD2Q5T7W7 516 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 SEL1L2Q5TEA6 688 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 RHBDD2Q6NTF9 364 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 MED25Q71SY5 747 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 RAB43Q86YS6 212 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 HPS6Q86YV9 775 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 PROKR1Q8TCW9 393 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 N4BP2L2Q92802 583 aaPredicted RBP18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 HDAC10Q969S8 669 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 TTC1Q99614 292 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 SPHK1Q9NYA1 384 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 G3BP2Q9UN86 482 aaKnown RBP18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 PCM1Q15154 2024 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 LRRK2Q5S007 2527 aa18.67■□□□□ 0.58
HCFC1R1-204ENST00000573095 OR1I1O60431 355 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 OR2B3O76000 313 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 GOT2P00505 430 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 PEBP1P30086 187 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 ATP1A4Q13733 1029 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SLC5A12Q1EHB4 618 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 NAPRTQ6XQN6 538 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 PPP1R21Q6ZMI0 780 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SLC22A15Q8IZD6 547 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 RNF10Q8N5U6 811 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 EFCAB3Q8N7B9 438 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 GLIS1Q8NBF1 620 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 FDCSPQ8NFU4 85 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 CPT1CQ8TCG5 803 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 PEX13Q92968 403 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 CASS4Q9NQ75 786 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 IMPACTQ9P2X3 320 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SLC2A6Q9UGQ3 507 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SRPK3Q9UPE1 567 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 TDRKHQ9Y2W6 561 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 SHANK1Q9Y566 2161 aa18.66■□□□□ 0.58
HCFC1R1-204ENST00000573095 ZSCAN9O15535 394 aaPredicted RBP18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 HCRTR1O43613 425 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 DPM1O60762 260 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 KLF7O75840 302 aaPredicted RBP18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 IFNB1P01574 187 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 ADRA1DP25100 572 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 PKLRP30613 574 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 GRIA1P42261 906 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 KIR2DS3Q14952 304 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 DNAJC21Q5F1R6 531 aaKnown RBP18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 ZNF534Q76KX8 674 aa18.65■□□□□ 0.58
HCFC1R1-204ENST00000573095 NLRP9Q7RTR0 991 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms