RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 HAUS5O94927 633 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 AP2A2O94973 939 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 S1PR4O95977 384 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 FTH1P02794 183 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 ECHS1P30084 290 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 PREPP48147 710 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 MLLT10P55197 1068 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 OR1D5P58170 312 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 GPX6P59796 221 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 MC1RQ01726 317 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 MGAT5Q09328 741 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 KYNUQ16719 465 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 CLPPQ16740 277 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 SYTL3Q4VX76 610 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 DCAF12Q5T6F0 453 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 CNSTQ6PJW8 725 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 OGFOD3Q6PK18 319 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 SCHIP1Q9P0W5 487 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 ZFATQ9P243 1243 aa12.99□□□□□ -0.33
CCDC40-205ENST00000571028 ZNF106Q9H2Y7 1883 aaKnown RBP12.99□□□□□ -0.33
CCDC40-205ENST00000571028 LRP4O75096 1905 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 F8W8V4 182 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 DUX1O43812 170 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 NIPSNAP2O75323 286 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 FAM153BP0C7A2 387 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CHRM3P20309 590 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 MAP4P27816 1152 aaKnown RBP12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CLCNKAP51800 687 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 RAB15P59190 212 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 TYSND1Q2T9J0 566 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 FAM153CQ494X1 144 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 UBAP2Q5T6F2 1119 aaKnown RBP12.98□□□□□ -0.33
CCDC40-205ENST00000571028 TEDDM1Q5T9Z0 273 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 C16orf46Q6P387 395 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CTAGE3PQ8IX95 158 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 NAGSQ8N159 534 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 OR2L2Q8NH16 312 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 HM13Q8TCT9 377 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 UBXN4Q92575 508 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 LPGAT1Q92604 370 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 TCF12Q99081 682 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 NDNQ99608 321 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 TSSK1BQ9BXA7 367 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 WWP1Q9H0M0 922 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CFAP20Q9Y6A4 193 aaKnown RBP12.98□□□□□ -0.33
CCDC40-205ENST00000571028 DNMT3AQ9Y6K1 912 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-205ENST00000571028 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
CCDC40-205ENST00000571028 NBASA2RRP1 2371 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 A1L4Q6 167 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 OR52A4PA6NMU1 304 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 E5RI56 91 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 MKRN2OSH3BPM6 223 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 QSOX1O00391 747 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 B4GAT1O43505 415 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 ACSL3O95573 720 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 SLC35G4P0C7Q5 338 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 PKMP14618 531 aaKnown RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 TCN2P20062 427 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 SAT1P21673 171 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 PDHA2P29803 388 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 CCR7P32248 378 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 HSPA14Q0VDF9 509 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 DUS1LQ6P1R4 473 aaKnown RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 ZNF449Q6P9G9 518 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 IYDQ6PHW0 289 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 CEP128Q6ZU80 1094 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 ZNF761Q86XN6 746 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 GPATCH11Q8N954 259 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 NLGN4YQ8NFZ3 816 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 STARD8Q92502 1023 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 CXorf40BQ96DE9 158 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 BIRC8Q96P09 236 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 FAM129AQ9BZQ8 928 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 TSPYL1Q9H0U9 437 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 P2RY12Q9H244 342 aa12.97□□□□□ -0.33
CCDC40-205ENST00000571028 CDC42EP4Q9H3Q1 356 aaKnown RBP12.97□□□□□ -0.33
CCDC40-205ENST00000571028 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms