RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNF835Q9Y2P0 537 aa10.03□□□□□ -0.8
CTDNEP1-202ENST00000570380 MEMO1Q9Y316 297 aa10.03□□□□□ -0.8
CTDNEP1-202ENST00000570380 HEBP2Q9Y5Z4 205 aa10.03□□□□□ -0.8
CTDNEP1-202ENST00000570380 SCN2AQ99250 2005 aa10.02□□□□□ -0.8
CTDNEP1-202ENST00000570380 C17orf113A0A1B0GUU1 675 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 GAPDHSO14556 408 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 SGTAO43765 313 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 NDST3O95803 873 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 HPP00738 406 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 FERP16591 822 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 MSH3P20585 1137 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 SPAM1P38567 509 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 PMP22Q01453 160 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 DPYSL3Q14195 570 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 NOMO1Q15155 1222 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 PPP2R5EQ16537 467 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 RBBP7Q16576 425 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 LONRF1Q17RB8 773 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 SLC5A12Q1EHB4 618 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 FKBP15Q5T1M5 1219 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 Q6ZPB1 254 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 TTLL10Q6ZVT0 673 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 AMIGO1Q86WK6 493 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 DNAJC22Q8N4W6 341 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CCNYQ8ND76 341 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 PHC3Q8NDX5 983 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CHDHQ8NE62 594 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 RBM41Q96IZ5 413 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 SRPK1Q96SB4 655 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 MDFIQ99750 246 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 FOXC2Q99958 501 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CCM2Q9BSQ5 444 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CEP41Q9BYV8 373 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 SLC26A1Q9H2B4 701 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 CBX8Q9HC52 389 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 DLL4Q9NR61 685 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 IRAK4Q9NWZ3 460 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 RPH3AQ9Y2J0 694 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-202ENST00000570380 GLYATL1P3A0A0U1RQE8 302 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 KLHL33A6NCF5 533 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 UGT2B7P16662 529 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 MX2P20592 715 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 AKT1P31749 480 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 PPP2R2AP63151 447 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 IFI35P80217 286 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 ATP13A4Q4VNC1 1196 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SARM1Q6SZW1 724 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 HOOK3Q86VS8 718 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SPPL2CQ8IUH8 684 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 KBTBD2Q8IY47 623 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SIRT6Q8N6T7 355 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SPATA22Q8NHS9 363 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 FLVCR1-AS1Q8TAF5 88 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 BRIX1Q8TDN6 353 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 BTBD6Q96KE9 485 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 LINC00615Q96LM1 132 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 OR2A14Q96R47 310 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SMOXQ9NWM0 555 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 IL17CQ9P0M4 197 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 CTSFQ9UBX1 484 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 ICKQ9UPZ9 632 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 SCINQ9Y6U3 715 aa10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-202ENST00000570380 A0A1B0GX78 115 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 VSTM2BA6NLU5 285 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 BUD23O43709 281 aaKnown RBP10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PRAMEF2O60811 474 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 USP1O94782 785 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 WDPCPO95876 746 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 CCDC172P0C7W6 258 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PRR35P0CG20 571 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PYGMP11217 842 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PIM1P11309 404 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-202ENST00000570380 GZMAP12544 262 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 IGFBP2P18065 325 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 LTBQ06643 244 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PPIDQ08752 370 aaKnown RBP10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PRKG2Q13237 762 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 ITGA9Q13797 1035 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PIGHQ14442 188 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-202ENST00000570380 BCL7AQ4VC05 210 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 CDKAL1Q5VV42 579 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 ZDHHC20Q5W0Z9 365 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 CCDC70Q6NSX1 233 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 PQLC3Q8N755 202 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 CCDC110Q8TBZ0 833 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 ZNF398Q8TD17 642 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 C8orf44Q96CB5 159 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 VPS50Q96JG6 964 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 MAGED4Q96JG8 741 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 HGH1Q9BTY7 390 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 SLC25A51Q9H1U9 297 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 OR52A5Q9H2C5 316 aa10□□□□□ -0.81
CTDNEP1-202ENST00000570380 TRABDQ9H4I3 376 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms