RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PDGFRAP16234 1089 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CTPS1P17812 591 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ITGAXP20702 1163 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 IL10P22301 178 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ACHEP22303 614 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TNFRSF8P28908 595 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 AXLP30530 894 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PTGER1P34995 402 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PRKCIP41743 596 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MAGEA9P43362 315 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 QARSP47897 775 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 GLUD2P49448 558 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 VPS41P49754 854 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 GP2P55259 537 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CLDN2P57739 230 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 POLR2FP61218 127 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 STX1BP61266 288 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 RHAGQ02094 409 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 LAMTOR4Q0VGL1 99 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 HTR4Q13639 388 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MLANAQ16655 118 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ME3Q16798 604 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 USP41Q3LFD5 358 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF528Q3MIS6 628 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 RABL3Q5HYI8 236 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 DPY19L2P1Q6NXN4 242 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 KIRREL2Q6UWL6 708 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 GBP6Q6ZN66 633 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 DGLUCYQ7Z3D6 616 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 POLNQ7Z5Q5 900 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 WDR53Q7Z5U6 358 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 RABEPKQ7Z6M1 372 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TBC1D26Q86UD7 250 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 HOOK3Q86VS8 718 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CEP57Q86XR8 500 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 KLBQ86Z14 1044 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ARID3BQ8IVW6 561 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 C1orf210Q8IVY1 113 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PEX5LQ8IYB4 626 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 LNX2Q8N448 690 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 SUMF1Q8NBK3 374 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TP53I13Q8NBR0 393 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ABHD11Q8NFV4 315 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 OR10S1Q8NGN2 331 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CFAP61Q8NHU2 1237 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TBCKQ8TEA7 893 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TCP11Q8WWU5 503 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 SMG7Q92540 1137 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 RFKQ969G6 155 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CENPTQ96BT3 561 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PTCD3Q96EY7 689 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 FAM20AQ96MK3 541 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 NLRP4Q96MN2 994 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 GNRHR2Q96P88 292 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 FRG2BQ96QU4 278 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MYADMQ96S97 322 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF347Q96SE7 839 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 THAP7Q9BT49 309 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 IFT27Q9BW83 186 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 C1QTNF5Q9BXJ0 243 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 NT5C3AQ9H0P0 336 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 GOLPH3LQ9H4A5 285 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 DHX33Q9H6R0 707 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MINDY3Q9H8M7 445 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 AKIP1Q9NQ31 210 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.18□□□□□ -1.93e-6■■□□□ 12.1
CNOT1-221ENST00000569924 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MARCH5Q9NX47 278 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 DLL3Q9NYJ7 618 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 VPS54Q9P1Q0 977 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ARMCX3Q9UH62 379 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 TBK1Q9UHD2 729 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 IL17BQ9UHF5 180 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 SH3BGRL2Q9UJC5 107 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 FBXW11Q9UKB1 542 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 FBXO4Q9UKT5 387 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 CNOT6Q9ULM6 557 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF148Q9UQR1 794 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 R3HDM2Q9Y2K5 976 aaKnown RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 KCTD3Q9Y597 815 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 PCDHGA1Q9Y5H4 931 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 HEMK1Q9Y5R4 338 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-221ENST00000569924 NFS1Q9Y697 457 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 MAU2Q9Y6X3 613 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 USP24Q9UPU5 2620 aa3.18□□□□□ -1.9
CNOT1-221ENST00000569924 F5P12259 2224 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DMXL1Q9Y485 3027 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DOPEY1Q5JWR5 2465 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MIA3Q5JRA6 1907 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD17O75179 2603 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 KANSL1LA0AUZ9 987 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 WDR27A2RRH5 827 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 WIPF3A6NGB9 483 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 OOEPA6NGQ2 149 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CYSRT1A8MQ03 144 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MAGEB17A8MXT2 336 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 VWC2LB2RUY7 222 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 KDM4EB2RXH2 506 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms