RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 SLC9B1P1A6NJY1 282 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 CCDC188H7C350 402 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 KPNA5O15131 536 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 PFDN6O15212 129 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 S1PR4O95977 384 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ESR1P03372 595 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 F7P08709 466 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ST6GAL1P15907 406 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 PEBP1P30086 187 aaKnown RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 PKLRP30613 574 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 FMO4P31512 558 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 TUBB4BP68371 445 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 DR1Q01658 176 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ABRQ12979 859 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 GRB7Q14451 532 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 GBX1Q14549 363 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 GPR19Q15760 415 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 PLEKHS1Q5SXH7 462 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ZNF470Q6ECI4 717 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 SPESP1Q6UW49 350 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 UNC5DQ6UXZ4 953 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 OTOAQ7RTW8 1153 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 C17orf53Q8N3J3 647 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ESX1Q8N693 406 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 GALNT6Q8NCL4 622 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 LSM14AQ8ND56 463 aaKnown RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 FLVCR1-AS1Q8TAF5 88 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 ZNF501Q96CX3 271 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 RUNDC3BQ96NL0 473 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 TRIM51Q9BSJ1 452 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 SLC12A9Q9BXP2 914 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 INTS10Q9NVR2 710 aaKnown RBP12.62□□□□□ -0.39
CNOT1-220ENST00000569916 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 LNPEPQ9UIQ6 1025 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 CRYL1Q9Y2S2 319 aa12.62□□□□□ -0.39
CNOT1-220ENST00000569916 H3BMM5 538 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 BANF1O75531 89 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 RPN2P04844 631 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 CHRM5P08912 532 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 PKMP14618 531 aaKnown RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 PVRP15151 417 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 UGT2B7P16662 529 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 PGAM1P18669 254 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 SLC1A2P43004 574 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 RAB28P51157 221 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 THOC5Q13769 683 aaKnown RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 CRYMQ14894 314 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 KYNUQ16719 465 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 LONRF1Q17RB8 773 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 C6orf15Q6UXA7 325 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 TRIM73Q86UV7 250 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 BPHLQ86WA6 291 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 UNC5BQ8IZJ1 945 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 ZSCAN1Q8NBB4 408 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 CFAP61Q8NHU2 1237 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 KIAA1143Q96AT1 154 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 FAM136AQ96C01 138 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 SLC45A3Q96JT2 553 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 TRAPPC9Q96Q05 1148 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 OR2A14Q96R47 310 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 KLHL25Q9H0H3 589 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 GPN2Q9H9Y4 310 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 FBXO6Q9NRD1 293 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 LATS2Q9NRM7 1088 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 CIDEBQ9UHD4 219 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
CNOT1-220ENST00000569916 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
CNOT1-220ENST00000569916 TK2O00142 265 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
CNOT1-220ENST00000569916 TTI1O43156 1089 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 KDM1AO60341 852 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 MSL3P1P0C860 447 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 ATP5DP30049 168 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 BDKRB1P46663 353 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 CYP4F2P78329 520 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 CTBP1Q13363 440 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
CNOT1-220ENST00000569916 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-220ENST00000569916 KCNMB4Q86W47 210 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms