RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	OR2L2	Q8NH16	312 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	MOSPD2	Q8NHP6	518 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	TBC1D16	Q8TBP0	767 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	USP28	Q96RU2	1077 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	RTN4R	Q9BZR6	473 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	ARRDC1-AS1	Q9H2J1	176 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	KRT84	Q9NSB2	600 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	TAB2	Q9NYJ8	693 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	OSGIN1	Q9UJX0	560 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	IGHV3OR16-10	A0A075B7F0	116 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	PRSS51	A0A1B0GVH4	220 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	MEX3A	A1L020	520 aa	Known RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	LRRC72	A6NJI9	287 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243		E9PI62	339 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SOCS3	O14543	225 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SSX4	O60224	188 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	RSL1D1	O76021	490 aa	Known RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	BAIAP3	O94812	1187 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	GPI	P06744	558 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	GARS	P41250	739 aa	Known RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	PSMC4	P43686	418 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	ARSE	P51690	589 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SIRPA	P78324	504 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	MS4A2	Q01362	244 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	PRKAA1	Q13131	559 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	DDX10	Q13206	875 aa	Known RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	NFATC2	Q13469	925 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	DRP2	Q13474	957 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	NECTIN1	Q15223	517 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	PDLIM3	Q53GG5	364 aa	Predicted RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SLC25A30	Q5SVS4	291 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SLC39A11	Q8N1S5	342 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF843	Q8N446	348 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	NIPA2	Q8N8Q9	360 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	RASL10A	Q92737	203 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SLCO2A1	Q92959	643 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	ERLEC1	Q96DZ1	483 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	OMA1	Q96E52	524 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	MPP4	Q96JB8	637 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	NEK1	Q96PY6	1258 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	BTBD10	Q9BSF8	475 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	VN1R1	Q9GZP7	353 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF701	Q9NV72	531 aa	Predicted RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	NPAP1	Q9NZP6	1156 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	SEC63	Q9UGP8	760 aa	Known RBP	2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	MAN1B1	Q9UKM7	699 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	GRID1	Q9ULK0	1009 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	GRIP1	Q9Y3R0	1128 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	PCDHGA5	Q9Y5G8	931 aa		2.8	□□□□□ -1.96
UBR1-209	ENST00000569243	ITIH6	Q6UXX5	1313 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PTP4A3	O75365	173 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	DFFB	O76075	338 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ACP2	P11117	423 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	VPREB1	P12018	145 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	MMP9	P14780	707 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	CA4	P22748	312 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PNLIPRP2	P54317	469 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ARF3	P61204	181 aa	Predicted RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ARF1	P84077	181 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	CYCS	P99999	105 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PLA2G7	Q13093	441 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PEX6	Q13608	980 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	DLG2	Q15700	870 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	FAM98B	Q52LJ0	330 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	MDH1B	Q5I0G3	518 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PLEKHS1	Q5SXH7	462 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	KRT79	Q5XKE5	535 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF343	Q6P1L6	599 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	CLEC17A	Q6ZS10	378 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	MAPKAPK5-AS1	Q8N8E1	139 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	C1orf131	Q8NDD1	294 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	OR10G8	Q8NGN5	311 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	RNF128	Q8TEB7	428 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ARSG	Q96EG1	525 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	FAM81B	Q96LP2	452 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	OR6C1	Q96RD1	312 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	TREX2	Q9BQ50	279 aa	Predicted RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	RAB11FIP5	Q9BXF6	653 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	UPF3A	Q9H1J1	476 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	PPIL3	Q9H2H8	161 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	HRH4	Q9H3N8	390 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	KCNK15	Q9H427	330 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ATP13A3	Q9H7F0	1226 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	SEPT11	Q9NVA2	429 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	LRWD1	Q9UFC0	647 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	ZDHHC2	Q9UIJ5	367 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	WDR37	Q9Y2I8	494 aa		2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	LAS1L	Q9Y4W2	734 aa	Known RBP	2.79	□□□□□ -1.96
UBR1-209	ENST00000569243	GAPDHS	O14556	408 aa	Predicted RBP	2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	PAPSS1	O43252	624 aa	Predicted RBP	2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	BCL2L11	O43521	198 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	CREG1	O75629	220 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	DUS4L	O95620	317 aa	Known RBP	2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	CLTB	P09497	229 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	ZSCAN5DP	P0CG00	497 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	ACSL1	P33121	698 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	RXRG	P48443	463 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	CX3CL1	P78423	397 aa		2.78	□□□□□ -1.96
UBR1-209	ENST00000569243	PPP2R2B	Q00005	443 aa		2.78	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms