RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 HCRTR1O43613 425 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ALOX12BO75342 701 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 JRKO75564 520 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 KRT1P04264 644 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ATP1B2P14415 290 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 UGT2B7P16662 529 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 SHMT2P34897 504 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 TYRO3Q06418 890 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 RPA4Q13156 261 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 PRKG2Q13237 762 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 BOP1Q14137 746 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 MESDQ14696 234 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 NR1I3Q14994 352 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 TAF1AQ15573 450 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ZIC1Q15915 447 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ODF2Q5BJF6 829 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF449Q6P9G9 518 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 ZGRF1Q86YA3 2104 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 NXPE1Q8N323 547 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 PHC3Q8NDX5 983 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 OR4K2Q8NGD2 314 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 HEXDCQ8WVB3 486 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 TFGQ92734 400 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 FKBP10Q96AY3 582 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 FCRL5Q96RD9 977 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 COPS8Q99627 209 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 BPIFA3Q9BQP9 254 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 LHPPQ9H008 270 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 CHST11Q9NPF2 352 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 SUCOQ9UBS9 1254 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 FKBPLQ9UIM3 349 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 TACC2O95359 2948 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 DCHS2Q6V1P9 2916 aa11.37□□□□□ -0.59
GTF3C1-209ENST00000568569 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 A0A0J9YY10 115 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 AGAP14A8MT82 685 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 SOCS6O14544 535 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 SERPINC1P01008 464 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ALBP02768 609 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 CTSBP07858 339 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 PDHA2P29803 388 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ZBED6P86452 979 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF658BQ4V348 819 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 KIRREL2Q6UWL6 708 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ISLR2Q6UXK2 745 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 BNC2Q6ZN30 1099 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 CLEC17AQ6ZS10 378 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 PID1Q7Z2X4 250 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 TMEM151BQ8IW70 566 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 CPLX3Q8WVH0 158 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ITLN2Q8WWU7 325 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 DLG3Q92796 817 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 VPS50Q96JG6 964 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 OR2A14Q96R47 310 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 VAT1Q99536 393 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 WDR54Q9H977 334 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 MRM3Q9HC36 420 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 SLC22A11Q9NSA0 550 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 SAE1Q9UBE0 346 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 ICKQ9UPZ9 632 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
GTF3C1-209ENST00000568569 A0A1B0GX78 115 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 PCDH17O14917 1159 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 CHRM5P08912 532 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 PIM1P11309 404 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 COX6B1P14854 86 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 PECAM1P16284 738 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 ITGALP20701 1170 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 ALAS2P22557 587 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 TDGF1P3P51864 188 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 KCNK10P57789 538 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 XIAPP98170 497 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 MFAP5Q13361 173 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 INAQ16352 499 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 SLC5A12Q1EHB4 618 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 TUBB8Q3ZCM7 444 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 UNC5AQ6ZN44 842 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF567Q8N184 647 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 RNF25Q96BH1 459 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 MAGEB10Q96LZ2 347 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 SPSB2Q99619 263 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 OR6C2Q9NZP2 312 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 RSPH14Q9UHP6 348 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 NF1P21359 2839 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 PCM1Q15154 2024 aa11.35□□□□□ -0.59
GTF3C1-209ENST00000568569 IGLV3-16A0A075B6K0 115 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ONECUT2O95948 504 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 AGTP01019 485 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms