RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 COX4I1P13073 169 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 RPS3P23396 243 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 CXCR2P25025 360 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MMP12P39900 470 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC25A3Q00325 362 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 TBL3Q12788 808 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SQLEQ14534 574 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 TMEM31Q5JXX7 168 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MACC1Q6ZN28 852 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SYT12Q8IV01 421 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 UBE2E3Q969T4 207 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 ECSITQ9BQ95 431 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 CCDC3Q9BQI4 270 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PPM1HQ9ULR3 514 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 OAS3Q9Y6K5 1087 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 NRG2O14511 850 aaPredicted RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CISD3P0C7P0 127 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 PIK3R1P27986 724 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 MRPS21P82921 87 aaKnown RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 DLG1Q12959 904 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CTSL3PQ5NE16 218 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 TMEM198Q66K66 360 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 BNC2Q6ZN30 1099 aaPredicted RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CEP68Q76N32 757 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 HORMAD1Q86X24 394 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 PRSS58Q8IYP2 241 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 KDM1BQ8NB78 822 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 RIN3Q8TB24 985 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 HM13Q8TCT9 377 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 DACT3Q96B18 629 aaPredicted RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 KLHL25Q9H0H3 589 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 COLEC10Q9Y6Z7 277 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 SPAG17Q6Q759 2223 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 VEGFDO43915 354 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 DNAJB13P59910 316 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 KLF10Q13118 480 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 AP1ARQ63HQ0 302 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC32A1Q9H598 525 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 TRPC4Q9UBN4 977 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 ENO4A6NNW6 628 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 H7C0S8 307 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 HNMTP50135 292 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 FRMD7Q6ZUT3 714 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 ZSWIM9Q86XI8 627 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC44A3Q8N4M1 653 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 LCN9Q8WX39 176 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 KCNA7Q96RP8 456 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 ANGPTL2Q9UKU9 493 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 AK5Q9Y6K8 562 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 ZNF682O95780 498 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CTSLP07711 333 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 GNAZP19086 355 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CTSCP53634 463 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 METTL21CQ5VZV1 264 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 KIAA1161Q6NSJ0 714 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 Q7L0L9 218 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 RRM2BQ7LG56 351 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 GALNT7Q86SF2 657 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 HHIPQ96QV1 700 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 OR52B2Q96RD2 323 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 CCDC28BQ9BUN5 200 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 PLAC1Q9HBJ0 212 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 MIEF1Q9NQG6 463 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 SCML1Q9UN30 329 aa11.87□□□□□ -0.51
TMEM170A-205ENST00000568559 MYO16Q9Y6X6 1858 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 OTOL1A6NHN0 477 aaPredicted RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 SEMA4FO95754 770 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 SNRPB2P08579 225 aaKnown RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 TCF3P15923 654 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 ALOX15P16050 662 aaPredicted RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 POU1F1P28069 291 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 CASP9P55211 416 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 XIAPP98170 497 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 ACVR1Q04771 509 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 PRAMEF14Q5SWL7 426 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 AGTRAPQ6RW13 159 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 GOLGA7Q7Z5G4 137 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 RMND5AQ9H871 391 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 POLR3HQ9Y535 204 aaPredicted RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 STX16O14662 325 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 LATO43561 262 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 UBTFL6P0CB48 400 aaPredicted RBP11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 AP2B1P63010 937 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 UNC50Q53HI1 259 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 SIX5Q8N196 739 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 RLN3Q8WXF3 142 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 LZICQ8WZA0 190 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 EME1Q96AY2 570 aa11.86□□□□□ -0.51
TMEM170A-205ENST00000568559 AHCYL2Q96HN2 611 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms