RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 LAYNQ6UX15 382 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 CHSY3Q70JA7 882 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 ULK2Q8IYT8 1036 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 PGBD3Q8N328 593 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 GLMNQ92990 594 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 LRCH3Q96II8 777 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 ZNF514Q96K75 400 aaPredicted RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 RTKNQ9BST9 563 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 NUSAP1Q9BXS6 441 aaKnown RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 MRPL1Q9BYD6 325 aaKnown RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 WDR26Q9H7D7 661 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 UBE2ZQ9H832 354 aaPredicted RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 EFCAB1Q9HAE3 211 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 FARSBQ9NSD9 589 aaKnown RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 GULP1Q9UBP9 304 aa6.9□□□□□ -1.31
SMG1-215ENST00000568239 COLQQ9Y215 455 aaPredicted RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 PCYT1BQ9Y5K3 369 aaPredicted RBP6.9□□□□□ -1.31
SMG1-215ENST00000568239 NR5A2O00482 541 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 MBTPS2O43462 519 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 VEGFDO43915 354 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ULK1O75385 1050 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 MATN4O95460 622 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC16A8O95907 504 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 RPL10P27635 214 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 ADSLP30566 484 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 AP1S2P56377 157 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 RPS21P63220 83 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 TBL3Q12788 808 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 NAE1Q13564 534 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 IRF4Q15306 451 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 TCEA2Q15560 299 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 CCDC6Q16204 474 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 C6orf163Q5TEZ5 329 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 C1orf146Q5VVC0 180 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 NEK10Q6ZWH5 1172 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SYTL1Q8IYJ3 562 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 MIER2Q8N344 545 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 TCAIMQ8N3R3 496 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 KYQ8NBH2 561 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 OR2T11Q8NH01 316 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 FAM3CQ92520 227 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 GABRG3Q99928 467 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ZNF385DQ9H6B1 395 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 EPHX3Q9H6B9 360 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 C8orf33Q9H7E9 229 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 CD93Q9NPY3 652 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 TM7SF3Q9NS93 570 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC7A8Q9UHI5 535 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ZNF490Q9ULM2 529 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 ZFR2Q9UPR6 939 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 NCKAP1Q9Y2A7 1128 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 CFAP20Q9Y6A4 193 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 SDK1Q7Z5N4 2213 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC22A2O15244 555 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC16A5O15375 505 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 AP1G1O43747 822 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 RNGTTO60942 597 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 VPS4BO75351 444 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SORBS2O94875 1100 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 CLDN9O95484 217 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 EBLN1P0CF75 366 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ADPRHP54922 357 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 HMGCS1Q01581 520 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 FGL2Q14314 439 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 MAPRE2Q15555 327 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 BCL7AQ4VC05 210 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 AGTRAPQ6RW13 159 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 Q6ZSR9 355 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 CHST15Q7LFX5 561 aaPredicted RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 AMZ2Q86W34 360 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC22A15Q8IZD6 547 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 DSELQ8IZU8 1212 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 RNF148Q8N7C7 305 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 LMNTD1Q8N9Z9 388 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 HIPK4Q8NE63 616 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 STON2Q8WXE9 905 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 SLC17A9Q9BYT1 436 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 PRO3102Q9H379 93 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 OSGEPL1Q9H4B0 414 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ELOVL6Q9H5J4 265 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 MRGBPQ9NV56 204 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 ASF1AQ9Y294 204 aa6.89□□□□□ -1.31
SMG1-215ENST00000568239 TDRKHQ9Y2W6 561 aaKnown RBP6.89□□□□□ -1.31
SMG1-215ENST00000568239 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 LATO43561 262 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 LILRB5O75023 590 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 PSIP1O75475 530 aaKnown RBP6.88□□□□□ -1.31
SMG1-215ENST00000568239 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
SMG1-215ENST00000568239 SLC2A4P14672 509 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 MSX2P35548 267 aaPredicted RBP6.88□□□□□ -1.31
SMG1-215ENST00000568239 CASP2P42575 452 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 NEK2P51955 445 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 CDKL1Q00532 357 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 STX5Q13190 355 aa6.88□□□□□ -1.31
SMG1-215ENST00000568239 PRKG2Q13237 762 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms