RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CCDC33Q8N5R6 958 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SUMF1Q8NBK3 374 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CCNYQ8ND76 341 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 BEND2Q8NDZ0 799 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PDCD6IPQ8WUM4 868 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ASB10Q8WXI3 467 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CCDC126Q96EE4 140 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 THOC1Q96FV9 657 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 FAR2Q96K12 515 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 RILPQ96NA2 401 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TSGA13Q96PP4 275 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 KCNK16Q96T55 309 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SERPINI1Q99574 410 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 RBBP8Q99708 897 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ACBD6Q9BR61 282 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 MED10Q9BTT4 135 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CCDC106Q9BWC9 280 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 EIF2AQ9BY44 585 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 B3GNT5Q9BYG0 378 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ALOXE3Q9BYJ1 711 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 DPEP3Q9H4B8 488 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 GSTO2Q9H4Y5 243 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CATSPERBQ9H7T0 1116 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PLAC1Q9HBJ0 212 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CSNK1G1Q9HCP0 422 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 MRPL40Q9NQ50 206 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SMYD2Q9NRG4 433 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 ARL8BQ9NVJ2 186 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SYBUQ9NX95 663 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 DDX43Q9NXZ2 648 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TAS2R1Q9NYW7 299 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 FBXW11Q9UKB1 542 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 TLK1Q9UKI8 766 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 FBXO4Q9UKT5 387 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 PRPF19Q9UMS4 504 aaKnown RBP5.26□□□□□ -1.57
CAPN3-217ENST00000567817 GINS2Q9Y248 185 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 SQORQ9Y6N5 450 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 R4GN57 208 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 MAST4O15021 2626 aa5.26□□□□□ -1.57
CAPN3-217ENST00000567817 CEP295Q9C0D2 2601 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 WDR27A2RRH5 827 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 A8MUI8 341 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 C2CD4DB7Z1M9 353 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PPEF2O14830 753 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CREB3O43889 395 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TBC1D4O60343 1298 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ENTPD5O75356 428 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ALDOAP04075 364 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 THP07101 528 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RPSAP08865 295 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PDGFRBP09619 1106 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SP9P0CG40 484 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SLC2A3P11169 496 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RALBP11234 206 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ODC1P11926 461 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ERCC2P18074 760 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TYMPP19971 482 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CCNCP24863 283 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 LMO2P25791 158 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PTPN3P26045 913 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PSMB4P28070 264 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CRABP2P29373 138 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PPM1AP35813 382 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CXCR3P49682 368 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 MRPS6P82932 125 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 COL10A1Q03692 680 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PRKAA1Q13131 559 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 MPP3Q13368 585 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 BMPR2Q13873 1038 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PDE1CQ14123 709 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RCN1Q15293 331 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ACCSLQ4AC99 568 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 NOMO2Q5JPE7 1267 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CFAP157Q5JU67 520 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PCID2Q5JVF3 399 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RABGAP1LQ5R372 815 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 C1orf146Q5VVC0 180 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SNX30Q5VWJ9 437 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 KCTD11Q693B1 232 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PM20D1Q6GTS8 502 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SYCE2Q6PIF2 218 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 DSTYKQ6XUX3 929 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 GALNT7Q86SF2 657 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TTC7BQ86TV6 843 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RBM23Q86U06 439 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TMEM126BQ8IUX1 230 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CNTN4Q8IWV2 1026 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ZNF567Q8N184 647 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ARHGAP18Q8N392 663 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 GPATCH11Q8N954 259 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 DNAAF3Q8N9W5 541 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 IL17RDQ8NFM7 739 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 OR6Y1Q8NGX8 325 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TBC1D15Q8TC07 691 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 DNAJB3Q8WWF6 145 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PEX13Q92968 403 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ZBTB10Q96DT7 871 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RNF31Q96EP0 1072 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms