RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SLC22A11Q9NSA0 550 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 FANCLQ9NW38 375 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 KCNN3Q9UGI6 736 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 ST6GALNAC2Q9UJ37 374 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 NXT1Q9UKK6 140 aaKnown RBP13.24□□□□□ -0.29
SMG1-213ENST00000567737 ACSL5Q9ULC5 683 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 ABCA4P78363 2273 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 MGAT4DA6NG13 374 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 SLCO2B1O94956 709 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 MT-CYBP00156 380 aaPredicted RBP13.23□□□□□ -0.29
SMG1-213ENST00000567737 HLA-DQB2P05538 268 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 ATP1A3P13637 1013 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 ITGAXP20702 1163 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 FDXRP22570 491 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 SOX11P35716 441 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 CD86P42081 329 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 ADAM8P78325 824 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 PMP22Q01453 160 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 MYBPHQ13203 477 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 SHISA6Q6ZSJ9 500 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 TAB3Q8N5C8 712 aaPredicted RBP13.23□□□□□ -0.29
SMG1-213ENST00000567737 SIRT6Q8N6T7 355 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 BRIX1Q8TDN6 353 aaKnown RBP13.23□□□□□ -0.29
SMG1-213ENST00000567737 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 GPR137Q96N19 417 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 PARVAQ9NVD7 372 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 ACTR10Q9NZ32 417 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 FAM8A1Q9UBU6 413 aa13.23□□□□□ -0.29
SMG1-213ENST00000567737 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
SMG1-213ENST00000567737 E9PLN8 166 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 FAM227AF5H4B4 570 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 MAP2K7O14733 419 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 PRAMEF1O95521 474 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 ACPPP15309 386 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 ABOP16442 354 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 DNASE1P24855 282 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 GABRA4P48169 554 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
SMG1-213ENST00000567737 TMPRSS15P98073 1019 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 MAMLD1Q13495 774 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 CLEC9AQ6UXN8 241 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 DMRTC2Q8IXT2 367 aaPredicted RBP13.22□□□□□ -0.29
SMG1-213ENST00000567737 DENND1AQ8TEH3 1009 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 HSPH1Q92598 858 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 FERD3LQ96RJ6 166 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 SLC26A1Q9H2B4 701 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 GANQ9H2C0 597 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 BPIFA1Q9NP55 256 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
SMG1-213ENST00000567737 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
SMG1-213ENST00000567737 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 ANKRD12Q6UB98 2062 aa13.22□□□□□ -0.29
SMG1-213ENST00000567737 A0A1B0GX78 115 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 HCRTR1O43613 425 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 GADD45BO75293 160 aaPredicted RBP13.21□□□□□ -0.29
SMG1-213ENST00000567737 WISP2O76076 250 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMG1-213ENST00000567737 TSPAN12O95859 305 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 WDPCPO95876 746 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 CTSBP07858 339 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 PRR35P0CG20 571 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 ARSFP54793 590 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 BECN1Q14457 450 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 LONRF2Q1L5Z9 754 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 ACAD10Q6JQN1 1059 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.29
SMG1-213ENST00000567737 SPESP1Q6UW49 350 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 LYPD8Q6UX82 237 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 TTLL10Q6ZVT0 673 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 AMIGO1Q86WK6 493 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 OR2L2Q8NH16 312 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 RBM41Q96IZ5 413 aaKnown RBP13.21□□□□□ -0.29
SMG1-213ENST00000567737 C18orf12Q96KH6 178 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 RNF32Q9H0A6 362 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.29
SMG1-213ENST00000567737 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMG1-213ENST00000567737 NSG1A0A0A6YYJ2 146 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 OR5H15A6NDH6 313 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 WFS1O76024 890 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 S1PR4O95977 384 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 POLBP06746 335 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 MMP2P08253 660 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 CCNCP24863 283 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 NSG1P42857 185 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
SMG1-213ENST00000567737 JAM2P57087 298 aa13.2□□□□□ -0.3
SMG1-213ENST00000567737 ALDH6A1Q02252 535 aaKnown RBP13.2□□□□□ -0.3
SMG1-213ENST00000567737 GALNT2Q10471 571 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms