RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SLC38A3Q99624 504 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 UNKQ9C0B0 810 aaKnown RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 TRIT1Q9H3H1 467 aaKnown RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 A0A096LPK6 155 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 CDC7O00311 574 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 NTN3O00634 580 aaPredicted RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 CDH16O75309 829 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 FTH1P19P0C7X4 201 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 BDKRB1P46663 353 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SERPINB8P50452 374 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 CCL7P80098 99 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 IRF9Q00978 393 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 KRT33BQ14525 404 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PHKG1Q16816 387 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 RAPH1Q70E73 1250 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 TMPRSS9Q7Z410 1059 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 DCUN1D3Q8IWE4 304 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 MYO1HQ8N1T3 1032 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SLC12A9Q9BXP2 914 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 XKR8Q9H6D3 395 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 POLG2Q9UHN1 485 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PLAGL1Q9UM63 463 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 ICKQ9UPZ9 632 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 TDRKHQ9Y2W6 561 aaKnown RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 ACOT9Q9Y305 439 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 RASGRF2O14827 1237 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 ZBTB14O43829 449 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 OPA1O60313 960 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 RFPL3O75679 317 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 CD1DP15813 335 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 TYRP1P17643 537 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SLC26A3P40879 764 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 EPHA4P54764 986 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 DMTNQ08495 405 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 ZNF844Q08AG5 666 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SQSTM1Q13501 440 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 CSHL1Q14406 222 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PPP1R3AQ16821 1122 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 CCDC157Q569K6 752 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 SH2D5Q6ZV89 423 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 UBE2R2Q712K3 238 aaPredicted RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 TAOK1Q7L7X3 1001 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PLD6Q8N2A8 252 aaKnown RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 LMNTD1Q8N9Z9 388 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 FBXO15Q8NCQ5 510 aaPredicted RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 OR4E2Q8NGC2 313 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 RSC1A1Q92681 617 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PTERQ96BW5 349 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 FOPNLQ96NB1 174 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 GPR78Q96P69 363 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 ROPN1BQ9BZX4 212 aaPredicted RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 ROPN1Q9HAT0 212 aaPredicted RBP12.11□□□□□ -0.47
KARS-204ENST00000564578 IGSF5Q9NSI5 407 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 PDE10AQ9Y233 779 aa12.11□□□□□ -0.47
KARS-204ENST00000564578 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 TLDC2A0PJX2 215 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 MYO1CO00159 1063 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 UBXN7O94888 489 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 TOP3BO95985 862 aaKnown RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 RPN2P04844 631 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 RPLP0P05388 317 aaKnown RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 CSF2RBP32927 897 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 CCNFP41002 786 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 KCNC1P48547 511 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 CLDN6P56747 220 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 GPLD1P80108 840 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 INSM1Q01101 510 aaPredicted RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 IFFO1Q0D2I5 559 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.473e-6■□□□□ 9.3
KARS-204ENST00000564578 TSNQ15631 228 aaKnown RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 ZXDCQ2QGD7 858 aaPredicted RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 AMZ1Q400G9 498 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 DHRS13Q6UX07 377 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
KARS-204ENST00000564578 ISCA2Q86U28 154 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 LINC01555Q8NAE3 123 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 LCN9Q8WX39 176 aa12.1□□□□□ -0.47
KARS-204ENST00000564578 RAD51AP1Q96B01 352 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms