RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 A0A0G2JNG1 304 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 KIR2DS3K7RE56 304 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 AQP9O43315 295 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 DFNA5O60443 496 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 EPN2O95208 641 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 MTHFD2P13995 350 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 PLA2G5P39877 138 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 GYS2P54840 703 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 STX3Q13277 289 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 KIR2DS5Q14953 304 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 TCEA2Q15560 299 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 KIF19Q2TAC6 998 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
CLK3-214ENST00000564096 ABRAXAS1Q6UWZ7 409 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 RASGRP3Q8IV61 690 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 CCNYL1Q8N7R7 359 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
CLK3-214ENST00000564096 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
CLK3-214ENST00000564096 LMX1AQ8TE12 382 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 FBXL8Q96CD0 374 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 L3HYPDHQ96EM0 354 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 TMEM237Q96Q45 408 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 HGH1Q9BTY7 390 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 POT1Q9NUX5 634 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 TBC1D29Q9UFV1 150 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 ADAM21Q9UKJ8 722 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
CLK3-214ENST00000564096 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
CLK3-214ENST00000564096 NEMP2A6NFY4 417 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 GIPC1O14908 333 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 NPHS1O60500 1241 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 HSPA4LO95757 839 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 CER1O95813 267 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 ANXA6P08133 673 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 SYPP08247 313 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 RPS17P08708 135 aaKnown RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 FGF3P11487 239 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 IMPDH1P20839 514 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 EEF1DP29692 281 aaKnown RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 LSP1P33241 339 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 GRIK2Q13002 908 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 RCN2Q14257 317 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 ARHGAP19Q14CB8 494 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 RPE65Q16518 533 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 ANKS6Q68DC2 871 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 RBM12BQ8IXT5 1001 aaKnown RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 OR5AR1Q8NGP9 310 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 OR9A1PQ8NGU1 263 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 ZNF75CPQ92670 426 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 DLG3Q92796 817 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 RHBDF1Q96CC6 855 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 FERD3LQ96RJ6 166 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 ELF4Q99607 663 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 C1QTNF3Q9BXJ4 246 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 TCEAL2Q9H3H9 227 aaPredicted RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 EML4Q9HC35 981 aaKnown RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 THAP1Q9NVV9 213 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 OPTCQ9UBM4 332 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 KLF15Q9UIH9 416 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 LNPEPQ9UIQ6 1025 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 TDRKHQ9Y2W6 561 aaKnown RBP12.48□□□□□ -0.41
CLK3-214ENST00000564096 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
CLK3-214ENST00000564096 LRP4O75096 1905 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 A6NCN8 305 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 B4DGG1 531 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 LMO7DNF2Z398 122 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 KATNA1O75449 491 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 STK16O75716 305 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 PIAS2O75928 621 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 SUPT7LO94864 414 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 MLYCDO95822 493 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 ALPPL2P10696 532 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CCND1P24385 295 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 MPLP40238 635 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 KCNC1P48547 511 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CCT8P50990 548 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 NAGLUP54802 743 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 BST1Q10588 318 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 LCP2Q13094 533 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 BIRC2Q13490 618 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 PCBP2Q15366 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLK3-214ENST00000564096 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 ZNF678Q5SXM1 525 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 LAIR1Q6GTX8 287 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 DUS1LQ6P1R4 473 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms