RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 A0A1W2PR77 199 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 KRT87PA6NCN2 255 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 GDF9O60383 454 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 WNT1P04628 370 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 CYP2A7P20853 494 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 ID4P47928 161 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 RPIAP49247 311 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 RACK1P63244 317 aaKnown RBP18.85■□□□□ 0.61
SPSB3-204ENST00000563741 FZD2Q14332 565 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 CGB2Q6NT52 195 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 SLC23A3Q6PIS1 610 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 FRMD7Q6ZUT3 714 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 RPS27LQ71UM5 84 aaKnown RBP18.85■□□□□ 0.61
SPSB3-204ENST00000563741 RD3Q7Z3Z2 195 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 RAB44Q7Z6P3 723 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-204ENST00000563741 KLHDC7BQ96G42 594 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 FOPNLQ96NB1 174 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 NUSAP1Q9BXS6 441 aaKnown RBP18.85■□□□□ 0.61
SPSB3-204ENST00000563741 DRC3Q9H069 523 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 ASB1Q9Y576 335 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 DGKBQ9Y6T7 804 aa18.85■□□□□ 0.61
SPSB3-204ENST00000563741 NPHS1O60500 1241 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 KCNJ13O60928 360 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 CATP04040 527 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 S100BP04271 92 aaPredicted RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 CHRNGP07510 517 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 RPS17P08708 135 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 GNSP15586 552 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 RPL10P27635 214 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 EEF1DP29692 281 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 BDKRB1P46663 353 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 CDKL1Q00532 357 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 EIF2B5Q13144 721 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 LRP8Q14114 963 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 UNC50Q53HI1 259 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 CFAP157Q5JU67 520 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 CPLX4Q7Z7G2 160 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 MFSD2AQ8NA29 543 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 RHBDF1Q96CC6 855 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 RMDN2Q96LZ7 410 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 EGFL8Q99944 293 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 C1QTNF3Q9BXJ4 246 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 ZDHHC5Q9C0B5 715 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 NSRP1Q9H0G5 558 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 MIR1-1HGQ9H1L0 117 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 GSTO2Q9H4Y5 243 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 TM9SF3Q9HD45 589 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 RXFP3Q9NSD7 469 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 ARL15Q9NXU5 204 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 PTBP2Q9UKA9 531 aaKnown RBP18.84■□□□□ 0.61
SPSB3-204ENST00000563741 ACSL5Q9ULC5 683 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 PSMD13Q9UNM6 376 aa18.84■□□□□ 0.61
SPSB3-204ENST00000563741 ANKRD12Q6UB98 2062 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 LNP1A1A4G5 178 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 CFIP05156 583 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 SLC35G4P0C7Q5 338 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 CD38P28907 300 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 SERPINB5P36952 375 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 CLCNKAP51800 687 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 LIMK1P53667 647 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 AP1S2P56377 157 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 OVGP1Q12889 678 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 C18orf21Q32NC0 220 aaPredicted RBP18.83■□□□□ 0.61
SPSB3-204ENST00000563741 ARL13AQ5H913 290 aaPredicted RBP18.83■□□□□ 0.61
SPSB3-204ENST00000563741 CDKL4Q5MAI5 379 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 IQCHQ86VS3 1027 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 HID1Q8IV36 788 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 LSMEM2Q8N112 164 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 MCOLN3Q8TDD5 553 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 BCAS4Q8TDM0 211 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 ESAMQ96AP7 390 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 TMEM79Q9BSE2 394 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 TRIM54Q9BYV2 358 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 TMEM168Q9H0V1 697 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 CAAP1Q9H8G2 361 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 DLL3Q9NYJ7 618 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 SLC6A14Q9UN76 642 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 WDR37Q9Y2I8 494 aa18.83■□□□□ 0.61
SPSB3-204ENST00000563741 TAPBPO15533 448 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 SUPT7LO94864 414 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 RASGRP1O95267 797 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 C1orf105O95561 183 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 HSPA4LO95757 839 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 ANXA5P08758 320 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 HIST1H2AGP0C0S8 130 aaPredicted RBP18.83■□□□□ 0.6
SPSB3-204ENST00000563741 HIST1H2ADP20671 130 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 CTBSQ01459 385 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 PUM1Q14671 1186 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPSB3-204ENST00000563741 CCSMST1Q4G0I0 132 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 SULT1C3Q6IMI6 304 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 UNC5DQ6UXZ4 953 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 PARGQ86W56 976 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 FBXO15Q8NCQ5 510 aaPredicted RBP18.83■□□□□ 0.6
SPSB3-204ENST00000563741 UBTD2Q8WUN7 234 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 HIST1H2AHQ96KK5 128 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 CNDP1Q96KN2 507 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 NSUN5Q96P11 429 aaKnown RBP18.83■□□□□ 0.6
SPSB3-204ENST00000563741 HIST1H2AJQ99878 128 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 H2AFJQ9BTM1 129 aa18.83■□□□□ 0.6
SPSB3-204ENST00000563741 EDEM2Q9BV94 578 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms