RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DNAI2Q9GZS0 605 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FZD8Q9H461 694 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SLA2Q9H6Q3 261 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 DBNDD1Q9H9R9 158 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FKRPQ9H9S5 495 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 MYNNQ9NPC7 610 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 TCP11L1Q9NUJ3 509 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SEPT10Q9P0V9 454 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 KLHL9Q9P2J3 617 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 POU2F3Q9UKI9 436 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 RALYQ9UKM9 306 aaKnown RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PADI2Q9Y2J8 665 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ASTN2O75129 1339 aaPredicted RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF541Q9H0D2 1346 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FEZF1A0PJY2 475 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 OR2M5A3KFT3 312 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SMIM30A4D0T7 59 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CYSRT1A8MQ03 144 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 HEPACAM2A8MVW5 462 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 TO15178 435 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 EIF3DO15371 548 aaKnown RBP eCLIP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SYNCRIPO60506 623 aaKnown RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 WISP2O76076 250 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 LBPP18428 481 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 DGKAP23743 735 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 MPZP25189 248 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 PITX1P78337 314 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CDK3Q00526 305 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE5Q13069 117 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE6Q13070 117 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CDC37Q16543 378 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CCDC92Q53HC0 331 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 LBHQ53QV2 105 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 TCTE1Q5JU00 501 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CCDC158Q5M9N0 1113 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 OR7E24Q6IFN5 339 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 FOXL2NBQ6ZUU3 175 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 TMPRSS11FQ6ZWK6 438 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 RAPH1Q70E73 1250 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 TLK2Q86UE8 772 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 EXOC3L1Q86VI1 746 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 NR2C2APQ86WQ0 139 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 C1orf52Q8N6N3 182 aaKnown RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SPC24Q8NBT2 197 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 OR52I2Q8NH67 350 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 PPP4R1Q8TF05 950 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 ROBO4Q8WZ75 1007 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 NR4A3Q92570 626 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SYN2Q92777 582 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CORO2AQ92828 525 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 EXT2Q93063 718 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM162AQ96A26 154 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 PHF21AQ96BD5 680 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 BSCL2Q96G97 398 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 OXNAD1Q96HP4 312 aaPredicted RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SFXN2Q96NB2 322 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 SEPHS2Q99611 448 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 LRRC1Q9BTT6 524 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 ACAT2Q9BWD1 397 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 MRPL9Q9BYD2 267 aaKnown RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 LRMDAQ9H2I8 198 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 LRRC4Q9HBW1 653 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 DPP3Q9NY33 737 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 POLLQ9UGP5 575 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 KCNG2Q9UJ96 466 aa3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 CPSF3Q9UKF6 684 aaKnown RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 ISY1Q9ULR0 285 aaKnown RBP3.09□□□□□ -1.91
SHCBP1-202ENST00000563219 DOCK7Q96N67 2140 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 C5orf60A6NFR6 353 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ANXA2P2A6NMY6 339 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 C15orf62A8K5M9 175 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 DNM1LO00429 736 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 DVL1O14640 695 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 AP5Z1O43299 807 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 KRT36O76013 467 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 IGKV3-20P01619 116 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 F7P08709 466 aaPredicted RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 TCF4P15884 667 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 HOXC8P31273 242 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 AHRP35869 848 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 IL15P40933 162 aaPredicted RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ARCN1P48444 511 aaKnown RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF132P52740 706 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 MAPK12P53778 367 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 TUBB4BP68371 445 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 RPL24P83731 157 aaKnown RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 PTPRCAPQ14761 206 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ZRSR1Q15695 479 aaKnown RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 IRAK1BP1Q5VVH5 260 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 FAM91A1Q658Y4 838 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 GBP6Q6ZN66 633 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 TMEM182Q6ZP80 229 aaPredicted RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF771Q7L3S4 317 aaPredicted RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 ARHGAP22Q7Z5H3 698 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 DSG4Q86SJ6 1040 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 CFAP206Q8IYR0 622 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 GBGT1Q8N5D6 347 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 NHLRC2Q8NBF2 726 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms