RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CEP97Q8IW35 865 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 CPNE1Q99829 537 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 TMEM121BQ9BXQ6 578 aaPredicted RBP16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 RHOJQ9H4E5 214 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 EPB41L1Q9H4G0 881 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 CAB39LQ9H9S4 337 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 KLHL42Q9P2K6 505 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 POLG2Q9UHN1 485 aa16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 MN1Q10571 1320 aaPredicted RBP16.94■□□□□ 0.3
CCNDBP1-204ENST00000563065 ATP5DP30049 168 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 SKIV2L2P42285 1042 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 TAS2R39P59534 338 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 FOXK2Q01167 660 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 PDAP1Q13442 181 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 UGT3A1Q6NUS8 523 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CEP128Q6ZU80 1094 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 RAB11FIP2Q7L804 512 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 ARHGAP22Q7Z5H3 698 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 ADGRF3Q8IZF5 1079 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 PRR11Q96HE9 360 aaPredicted RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 RBBP8Q99708 897 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 DPYSL5Q9BPU6 564 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 MENTQ9BUN1 341 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 STRADBQ9C0K7 418 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 SPHK1Q9NYA1 384 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 TXNDC16Q9P2K2 825 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 SLC39A10Q9ULF5 831 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CORO1CQ9ULV4 474 aaPredicted RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 ARHGEF33A8MVX0 844 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CCL4P13236 92 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 ITIH1P19827 911 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CD9P21926 228 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 GP5P40197 560 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 SEPHS1P49903 392 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 KPNA2P52292 529 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 GABREP78334 506 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CYP4F3Q08477 520 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 OOSP2Q86WS3 158 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 DCUN1D3Q8IWE4 304 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 FBXO39Q8N4B4 442 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 MDM1Q8TC05 714 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 LINGO1Q96FE5 620 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 FOPNLQ96NB1 174 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 MAP3K3Q99759 626 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 OCIAD1Q9NX40 245 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 LOXL2Q9Y4K0 774 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 AK5Q9Y6K8 562 aa16.93■□□□□ 0.3
CCNDBP1-204ENST00000563065 CHD8Q9HCK8 2581 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 CELSR3Q9NYQ7 3312 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 CCDC187A0A096LP49 1063 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 IGHV5-51A0A0C4DH38 117 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 GSAPA4D1B5 854 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 TMX2-CTNND1H3BSU7 103 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 PSIP1O75475 530 aaKnown RBP16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 RASSF9O75901 435 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 TSPAN12O95859 305 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 MPC1LP0DKB6 136 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 PHBP35232 272 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 GMPRP36959 345 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ETV5P41161 510 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 SLMAPQ14BN4 828 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 GRTP1Q5TC63 336 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 CACHD1Q5VU97 1274 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ARMC6Q6NXE6 501 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 KLHL35Q6PF15 583 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 NEK10Q6ZWH5 1172 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 TAX1BP1Q86VP1 789 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 LINC01555Q8NAE3 123 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 WDR36Q8NI36 951 aaKnown RBP16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ASB11Q8WXH4 323 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 DLG3Q92796 817 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 GRAMD1AQ96CP6 724 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ZDHHC12Q96GR4 267 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 TXLNGYQ9BZA5 131 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 NRSN2Q9GZP1 204 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 RAB33BQ9H082 229 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ACSS3Q9H6R3 686 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 ADAMTS6Q9UKP5 1117 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 IKZF3Q9UKT9 509 aa16.92■□□□□ 0.3
CCNDBP1-204ENST00000563065 GFYI3L273 518 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 PLD2O14939 933 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 RPN2P04844 631 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 CBSLP0DN79 551 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 ENO3P13929 434 aaPredicted RBP16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 PEBP1P30086 187 aaKnown RBP16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 PKLRP30613 574 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 CBSP35520 551 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 LSSP48449 732 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 PMS2P54278 862 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 VSNL1P62760 191 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 TRA2AQ13595 282 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 UAP1Q16222 522 aaPredicted RBP16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 FAM20CQ8IXL6 584 aa16.91■□□□□ 0.3
CCNDBP1-204ENST00000563065 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms