RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 MAD2L1BPQ15013 274 aaPredicted RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 NR6A1Q15406 480 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 PROX2Q3B8N5 592 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 SETMARQ53H47 684 aaPredicted RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 AGAP6Q5VW22 663 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 KDM4DQ6B0I6 523 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 ZNF544Q6NX49 715 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 FBXO46Q6PJ61 603 aaPredicted RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 AFTPHQ6ULP2 937 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 KBTBD8Q8NFY9 601 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 PDLIM5Q96HC4 596 aaKnown RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 CEP295NLQ96MC4 621 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 AGAP4Q96P64 663 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 HECAQ9UBI9 543 aaPredicted RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 RAPGEFL1Q9UHV5 662 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 SLCO3A1Q9UIG8 710 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 NDRG4Q9ULP0 352 aaKnown RBP18.27■□□□□ 0.52
BBS4-204ENST00000562084 HS3ST4Q9Y661 456 aa18.27■□□□□ 0.52
BBS4-204ENST00000562084 ZBBXA8MT70 800 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PTGESO14684 152 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 VPS26AO75436 327 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 MED26O95402 600 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 INHAP05111 366 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 ETV6P41212 452 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 KRT6CP48668 564 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 AGTR2P50052 363 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 DGKQP52824 942 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ERVPABLB-1P60509 514 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 SLC10A7Q0GE19 358 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CAMK2BQ13554 666 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 DGCR6Q14129 220 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 AP5B1Q2VPB7 878 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 RSBN1Q5VWQ0 802 aaPredicted RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 IL27RAQ6UWB1 636 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CALHM3Q86XJ0 350 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 METTL6Q8TCB7 284 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 RASSF5Q8WWW0 418 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 GBF1Q92538 1859 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 NCLNQ969V3 563 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 TMEM248Q9NWD8 314 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ASIC5Q9NY37 505 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ZNF221Q9UK13 617 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 SAMD4AQ9UPU9 718 aaKnown RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 PKP3Q9Y446 797 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 POLR3HQ9Y535 204 aaPredicted RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 PEX16Q9Y5Y5 336 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 AIREO43918 545 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CCNKO75909 580 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 S100BP04271 92 aaPredicted RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 MMP3P08254 477 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 SERPINF2P08697 491 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CYBAP13498 195 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PCSK2P16519 638 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PFKLP17858 780 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PRKACGP22612 351 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PBX3P40426 434 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CLK3P49761 638 aaKnown RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 MAXP61244 160 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 PCBP2Q15366 365 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■■■ 45.7
BBS4-204ENST00000562084 TPRG1LQ5T0D9 272 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ANKRD34AQ69YU3 496 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 DESI1Q6ICB0 168 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CES5AQ6NT32 575 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 DET1Q7L5Y6 550 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CCDC103Q8IW40 242 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ABI1Q8IZP0 508 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 ARRDC4Q8NCT1 418 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 SERPINB11Q96P15 392 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 RIBC2Q9H4K1 309 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 EXD2Q9NVH0 621 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 NLE1Q9NVX2 485 aaPredicted RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 C1orf109Q9NX04 203 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 CD274Q9NZQ7 290 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
BBS4-204ENST00000562084 IKZF3Q9UKT9 509 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 MED16Q9Y2X0 877 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 COMMD10Q9Y6G5 202 aa18.26■□□□□ 0.51
BBS4-204ENST00000562084 UBA6A0AVT1 1052 aaPredicted RBP18.25■□□□□ 0.51
BBS4-204ENST00000562084 LOC110117498-PIK3R3F6TDL0 507 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 SCO2O43819 266 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 ERN1O75460 977 aaKnown RBP18.25■□□□□ 0.51
BBS4-204ENST00000562084 NDUFS3O75489 264 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 NR4A2P43354 598 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 COPZ1P61923 177 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 IL10RBQ08334 325 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
BBS4-204ENST00000562084 COLEC12Q5KU26 742 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 FAM171BQ6P995 826 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 TTC23LQ6PF05 361 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 TAS2R42Q7RTR8 314 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 SNX20Q7Z614 316 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 BLOC1S5Q8TDH9 187 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 PIK3R3Q92569 461 aa18.25■□□□□ 0.51
BBS4-204ENST00000562084 HMCESQ96FZ2 354 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms