RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CHRM5P08912 532 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 NR1D1P20393 614 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 PEBP1P30086 187 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 FOXL2P58012 376 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 MRPS25P82663 173 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CHAF1BQ13112 559 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 GPS2Q13227 327 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 ZIC1Q15915 447 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 PTCHD3Q3KNS1 767 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 C1orf189Q5VU69 101 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 BORAQ6PGQ7 559 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CNSTQ6PJW8 725 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CDHR3Q6ZTQ4 885 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 PRICKLE2Q7Z3G6 844 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 KLHL7Q8IXQ5 586 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 D2HGDHQ8N465 521 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 ZFPM2Q8WW38 1151 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CLIP3Q96DZ5 547 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 SLC45A3Q96JT2 553 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 PWWP2AQ96N64 755 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CD180Q99467 661 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 C19orf43Q9BQ61 176 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 KIFC1Q9BW19 673 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 SLC7A5P2Q9GIP4 190 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 TWSG1Q9GZX9 223 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 SPRTNQ9H040 489 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 DDX47Q9H0S4 455 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CHST8Q9H2A9 424 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 TFB2MQ9H5Q4 396 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 FBXO6Q9NRD1 293 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 C1GALT1Q9NS00 363 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 HOMER3Q9NSC5 361 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 SEMA5BQ9P283 1151 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 PADI1Q9ULC6 663 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 RIMKLBQ9ULI2 386 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 SOX13Q9UN79 622 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 ZNF462Q96JM2 2506 aa9.17□□□□□ -0.94
NSMCE1-203ENST00000562039 QSOX1O00391 747 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SLC28A2O43868 658 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 PHF2O75151 1096 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 PLA2G2AP14555 144 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 CYP2A7P20853 494 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 AOAHP28039 575 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SHMT2P34897 504 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 CCR10P46092 362 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TTPAP49638 278 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 POLE2P56282 527 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 GNG11P61952 73 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TUBB4BP68371 445 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SARNPP82979 210 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 CTBP1Q13363 440 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TSTA3Q13630 321 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TUBB2AQ13885 445 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 DHX34Q14147 1143 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SLC9A5Q14940 896 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TMED2Q15363 201 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 PPP1R7Q15435 360 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 AARS2Q5JTZ9 985 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 HP1BP3Q5SSJ5 553 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SPESP1Q6UW49 350 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 C4orf22Q6V702 233 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 KMT5CQ86Y97 462 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 DENND6AQ8IWF6 608 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TBC1D21Q8IYX1 336 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SLC22A15Q8IZD6 547 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 C17orf53Q8N3J3 647 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 C19orf47Q8N9M1 422 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 OR5K2Q8NHB8 316 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 N4BP2L2Q92802 583 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SERPINB12Q96P63 405 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 OR2A14Q96R47 310 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TUBB2BQ9BVA1 445 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 CARD6Q9BX69 1037 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TSSK1BQ9BXA7 367 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 P2RY12Q9H244 342 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 ABCF3Q9NUQ8 709 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SAMD15Q9P1V8 674 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 GNPTGQ9UJJ9 305 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 SNX12Q9UMY4 172 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 BTRCQ9Y297 605 aa9.16□□□□□ -0.94
NSMCE1-203ENST00000562039 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 CTAGE9A4FU28 777 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 K7EM74 188 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 CPNE3O75131 537 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 GPC4O75487 556 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 DNAJB5O75953 348 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 ITGB2P05107 769 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 GSTM1P09488 218 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 CHRM3P20309 590 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 PSMB5P28074 263 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 PKLRP30613 574 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 PPARGP37231 505 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 GRIA3P42263 894 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 MPP1Q00013 466 aa9.15□□□□□ -0.94
NSMCE1-203ENST00000562039 GSTM4Q03013 218 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms