RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PDZK1P1A8MUH7 402 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ARHGEF33A8MVX0 844 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MATN2O00339 956 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 E2F3O00716 465 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 TAPBPO15533 448 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 DCTN3O75935 186 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 CHEK2O96017 543 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 OTCP00480 354 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 PDGFBP01127 241 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 RPS17P08708 135 aaKnown RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 CTSEP14091 401 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MPSTP25325 297 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ARL1P40616 181 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 AGTR2P50052 363 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 CCNG1P51959 295 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 SF3A3Q12874 501 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP3-219ENST00000561326 ILF3Q12906 894 aaKnown RBP eCLIP10.04□□□□□ -0.82e-6■■■■□ 21.5
USP3-219ENST00000561326 GTF2H2Q13888 395 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 UAP1L1Q3KQV9 507 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 SH2D4BQ5SQS7 431 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 CWF19L1Q69YN2 538 aaKnown RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 CGB2Q6NT52 195 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 GTF2H2CQ6P1K8 395 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 WASH2PQ6VEQ5 465 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ZNF771Q7L3S4 317 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 LRRC70Q7Z2Q7 622 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 EFL1Q7Z2Z2 1120 aaKnown RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 CUZD1Q86UP6 607 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 HID1Q8IV36 788 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 DCUN1D3Q8IWE4 304 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 TBC1D21Q8IYX1 336 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 DEFB119Q8N690 84 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ZNF781Q8N8C0 355 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 RFWD2Q8NHY2 731 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 CCT6BQ92526 530 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 TSACCQ96A04 125 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 MOCOSQ96EN8 888 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MAGEB10Q96LZ2 347 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 HSPA12BQ96MM6 686 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 FERD3LQ96RJ6 166 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 TMEM120AQ9BXJ8 343 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 SHCBP1LQ9BZQ2 653 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ZDHHC5Q9C0B5 715 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MVB12BQ9H7P6 319 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 SEMA4BQ9NPR2 832 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 MRPL40Q9NQ50 206 aaKnown RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 WASH6PQ9NQA3 447 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ACSS2Q9NR19 701 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MARCOQ9UEW3 520 aaPredicted RBP10.04□□□□□ -0.8
USP3-219ENST00000561326 POLG2Q9UHN1 485 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ZDHHC2Q9UIJ5 367 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 PSMD13Q9UNM6 376 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 KCNK6Q9Y257 313 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 TRAF6Q9Y4K3 522 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 BDP1A6H8Y1 2624 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 LRRC14BA6NHZ5 514 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 AZIN1O14977 448 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 WDR47O94967 919 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ESRRBO95718 433 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 SLC2A4P14672 509 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ALOX15P16050 662 aaPredicted RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 CCND1P24385 295 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 RPL10P27635 214 aaKnown RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 NDUFS1P28331 727 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ARRB2P32121 409 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 AQP5P55064 265 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 SH3BP2P78314 561 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 CTBSQ01459 385 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ARHGAP19Q14CB8 494 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 TEAD4Q15561 434 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ZSCAN26Q16670 478 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ALG11Q2TAA5 492 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 PTCHD3Q3KNS1 767 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 AGTRAPQ6RW13 159 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ACAD11Q709F0 780 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 GOLGA7Q7Z5G4 137 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 MILR1Q7Z6M3 343 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP3-219ENST00000561326 SYTL1Q8IYJ3 562 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 TMEFF1Q8IYR6 380 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 SNX31Q8N9S9 440 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 OR5K2Q8NHB8 316 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 AGR3Q8TD06 166 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 SETD7Q8WTS6 366 aaKnown RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 C10orf82Q8WW14 230 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 DNASE2BQ8WZ79 361 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ESAMQ96AP7 390 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 NSUN5Q96P11 429 aaKnown RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 LRRC37BQ96QE4 947 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms