RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SLC22A15Q8IZD6 547 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 OR8K5Q8NH50 307 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 OR1L3Q8NH93 324 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 MR1Q95460 341 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 MS4A14Q96JA4 679 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 LATS2Q9NRM7 1088 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 SPHK1Q9NYA1 384 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 BFARQ9NZS9 450 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CIDEBQ9UHD4 219 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CDYLQ9Y232 598 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 PCDHGA6Q9Y5G7 932 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 C21orf140B9A014 251 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 PRMT5O14744 637 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 CREG1O75629 220 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 CHRM5P08912 532 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 ARNTP27540 789 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 PPARGP37231 505 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 NPY2RP49146 381 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 TTPAP49638 278 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 PLOD1Q02809 727 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 GPS1Q13098 491 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 KCNJ11Q14654 390 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 DEFB110Q30KQ9 67 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 CDHR3Q6ZTQ4 885 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 PTRH1Q86Y79 214 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 C19orf47Q8N9M1 422 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 C9orf43Q8TAL5 461 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 APOBEC4Q8WW27 367 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 MFSD3Q96ES6 412 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 TSSK1BQ9BXA7 367 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 AP1M1Q9BXS5 423 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 TWSG1Q9GZX9 223 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 HOMER3Q9NSC5 361 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 POLG2Q9UHN1 485 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 TUBD1Q9UJT1 453 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 POLHQ9Y253 713 aa16.64■□□□□ 0.25
CDC42BPB-208ENST00000561271 SETXQ7Z333 2677 aaKnown RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 GOLGA8KD6RF30 607 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 GOLGA8TH3BQL2 631 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 APOA4P06727 396 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CYP2A7P20853 494 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 PEBP1P30086 187 aaKnown RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 EIF3BP55884 814 aaKnown RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 TMED2Q15363 201 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 ANKRD22Q5VYY1 191 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 PTRHD1Q6GMV3 140 aaKnown RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 LRRC8BQ6P9F7 803 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 HOOK3Q86VS8 718 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 LMNTD1Q8N9Z9 388 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CFAP61Q8NHU2 1237 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 FLVCR1-AS1Q8TAF5 88 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 ASZ1Q8WWH4 475 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CPT1BQ92523 772 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CLIP3Q96DZ5 547 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 OR2A14Q96R47 310 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CARD6Q9BX69 1037 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 CHST8Q9H2A9 424 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 ACTR5Q9H9F9 607 aaPredicted RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 MRM3Q9HC36 420 aaKnown RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 FAM60AQ9NP50 221 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 ZNF71Q9NQZ8 489 aaPredicted RBP16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 GNPTGQ9UJJ9 305 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 SOX13Q9UN79 622 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 KCNMB2Q9Y691 235 aa16.63■□□□□ 0.25
CDC42BPB-208ENST00000561271 FLNBO75369 2602 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 AP3B1O00203 1094 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 MAP3K7O43318 606 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 AVILO75366 819 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 GPC4O75487 556 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 TMEM63AO94886 807 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 VAPBO95292 243 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 KRT14P02533 472 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 MSL3P1P0C860 447 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 AOAHP28039 575 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 PTPN4P29074 926 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 PKLRP30613 574 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 IL10RAQ13651 578 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 ZIC1Q15915 447 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 PLEKHS1Q5SXH7 462 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 LCN10Q6JVE6 187 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 TAX1BP1Q86VP1 789 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 DSELQ8IZU8 1212 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 MPP5Q8N3R9 675 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 RASGEF1CQ8N431 466 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 MAGOHBQ96A72 148 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 TRIM56Q9BRZ2 755 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 KIFC1Q9BW19 673 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 P2RY12Q9H244 342 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 GRPEL1Q9HAV7 217 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 SYTL2Q9HCH5 934 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 OR6C2Q9NZP2 312 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 RUVBL2Q9Y230 463 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 MAN2B2Q9Y2E5 1009 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 JRKLQ9Y4A0 524 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 UBR5O95071 2799 aaPredicted RBP16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 DOPEY2Q9Y3R5 2298 aa16.62■□□□□ 0.25
CDC42BPB-208ENST00000561271 ASH1LQ9NR48 2969 aaKnown RBP16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms