RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PTGIRP43119 386 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 CD97P48960 835 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 PGDP52209 483 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 MLLT10P55197 1068 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 PTCHD3Q3KNS1 767 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 TSTD2Q5T7W7 516 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 FAM69BQ5VUD6 431 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 PAPD7Q5XG87 772 aaKnown RBP15.68■□□□□ 0.1
SNX1-213ENST00000561026 FAM198BQ6UWH4 519 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 NAPRTQ6XQN6 538 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 HOOK3Q86VS8 718 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 C19orf47Q8N9M1 422 aaKnown RBP15.68■□□□□ 0.1
SNX1-213ENST00000561026 OR5K2Q8NHB8 316 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNX1-213ENST00000561026 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 TTC1Q99614 292 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 SLC7A5P2Q9GIP4 190 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 CHRNA10Q9GZZ6 450 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 FAM60AQ9NP50 221 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 SPHK1Q9NYA1 384 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 OR6C2Q9NZP2 312 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 RIMKLBQ9ULI2 386 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 ZNF148Q9UQR1 794 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 MED13Q9UHV7 2174 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 RP1L1Q8IWN7 2480 aaPredicted RBP15.67■□□□□ 0.1
SNX1-213ENST00000561026 CLEC18AA5D8T8 446 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 E7EVH7 732 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 IFNB1P01574 187 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 ADRA1DP25100 572 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 ACVR1Q04771 509 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 NCF4Q15080 339 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 ZIC1Q15915 447 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 SYTL3Q4VX76 610 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 ZNF385CQ66K41 422 aaPredicted RBP15.67■□□□□ 0.1
SNX1-213ENST00000561026 AFTPHQ6ULP2 937 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 CLEC18BQ6UXF7 455 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 PPP1R21Q6ZMI0 780 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 TRIM73Q86UV7 250 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 SLC13A5Q86YT5 568 aaPredicted RBP15.67■□□□□ 0.1
SNX1-213ENST00000561026 GPR135Q8IZ08 494 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 CLEC18CQ8NCF0 446 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 OR4L1Q8NH43 312 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 FLVCR1-AS1Q8TAF5 88 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 UBE2Q2Q8WVN8 375 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 ZNF778Q96MU6 729 aa15.67■□□□□ 0.1
SNX1-213ENST00000561026 TDRKHQ9Y2W6 561 aaKnown RBP15.67■□□□□ 0.1
SNX1-213ENST00000561026 F8W8V4 182 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 H3BMH7 237 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 CEACAM4O75871 244 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 TMEM63AO94886 807 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 AGXTP21549 392 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 CDC25BP30305 580 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 GABRA4P48169 554 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 SRSF1Q07955 248 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNX1-213ENST00000561026 SEL1L2Q5TEA6 688 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 ZNF534Q76KX8 674 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 NLRP9Q7RTR0 991 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 ATCAYQ86WG3 371 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 ZBTB2Q8N680 514 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 SPC24Q8NBT2 197 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 C1orf54Q8WWF1 131 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 N4BP2L2Q92802 583 aaPredicted RBP15.66■□□□□ 0.1
SNX1-213ENST00000561026 SGSM3Q96HU1 749 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 CASS4Q9NQ75 786 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 ANKMY1Q9P2S6 941 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 AP1M2Q9Y6Q5 423 aa15.66■□□□□ 0.1
SNX1-213ENST00000561026 TTLL8A6PVC2 850 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 C9J4A7 227 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 HCRTR1O43613 425 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 OR2B3O76000 313 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 APRTP07741 180 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 ETS1P14921 441 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 CCR7P32248 378 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 SNX1Q13596 522 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 DNAJC21Q5F1R6 531 aaKnown RBP15.65■□□□□ 0.1
SNX1-213ENST00000561026 MED25Q71SY5 747 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 PRUNE1Q86TP1 453 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 TMEM102Q8N9M5 508 aaPredicted RBP15.65■□□□□ 0.1
SNX1-213ENST00000561026 OR6P1Q8NGX9 317 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 PEX13Q92968 403 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 DHRS4Q9BTZ2 278 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 TSGA10Q9BZW7 698 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 SPRTNQ9H040 489 aaPredicted RBP15.65■□□□□ 0.1
SNX1-213ENST00000561026 PLAGL1Q9UM63 463 aa15.65■□□□□ 0.1
SNX1-213ENST00000561026 A0A0J9YY10 115 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 KDM1AO60341 852 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 KLF7O75840 302 aaPredicted RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 PPARGP37231 505 aaPredicted RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 CSE1LP55060 971 aaKnown RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 PRAMEP78395 509 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 SEMA3AQ14563 771 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 KIR2DS3Q14952 304 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 DEFB110Q30KQ9 67 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 FASTKD1Q53R41 847 aaKnown RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 RHBDD2Q6NTF9 364 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 SLC22A15Q8IZD6 547 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 FAM26EQ8N5C1 309 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 CCDC89Q8N998 374 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms