RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 HSD3B1P14060 373 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TYRP14679 529 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 LHCGRP22888 699 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 HSD3B2P26439 372 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 IL12AP29459 219 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CA8P35219 290 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 BMPR1AP36894 532 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ARL1P40616 181 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 STK19P49842 368 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 HTR6P50406 440 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PNLIPRP1P54315 467 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 NME5P56597 212 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TUBA4AP68366 448 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 B4GALNT1Q00973 533 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ABRAXAS2Q15018 415 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PTPRRQ15256 657 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ATP6AP1Q15904 470 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PHKG1Q16816 387 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 IMPG1Q17R60 797 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 DPY19L1Q2PZI1 675 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ATP13A5Q4VNC0 1218 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TIGD2Q4W5G0 525 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PAGE3Q5JUK9 113 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 HMBOX1Q6NT76 420 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PSRC1Q6PGN9 363 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 DLEU7Q6UYE1 221 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CYP2R1Q6VVX0 501 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SPATA31D4Q6ZUB0 917 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 UBE2R2Q712K3 238 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 TSPAN33Q86UF1 283 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ADIPOR2Q86V24 386 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CARM1Q86X55 608 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TMEM25Q86YD3 366 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 KIAA2013Q8IYS2 634 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CLDN19Q8N6F1 224 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 OR2A12Q8NGT7 310 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 HM13Q8TCT9 377 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CANT1Q8WVQ1 401 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ASZ1Q8WWH4 475 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SLC13A3Q8WWT9 602 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 STARD8Q92502 1023 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 GLMNQ92990 594 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PPWD1Q96BP3 646 aaKnown RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 CMTM7Q96FZ5 175 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 RPL10LQ96L21 214 aaKnown RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 NSMCE2Q96MF7 247 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 RDH12Q96NR8 316 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TCF25Q9BQ70 676 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SLC39A3Q9BRY0 314 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 APOL5Q9BWW9 433 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 YTHDF1Q9BYJ9 559 aaKnown RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 DPY30Q9C005 99 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ACTL8Q9H568 366 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CLMPQ9H6B4 373 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 GORASP2Q9H8Y8 452 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TLR9Q9NR96 1032 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PNPLA3Q9NST1 481 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 TUBA8Q9NY65 449 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 PDE10AQ9Y233 779 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 MAN2B2Q9Y2E5 1009 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SLC27A6Q9Y2P4 619 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 POLR3HQ9Y535 204 aaPredicted RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 ZFC3H1O60293 1989 aaKnown RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 KCNE1BA0A087WTH5 132 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 NEDD8-MDP1E9PL57 170 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 C5orf67F2Z3F1 127 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 H0Y858 1186 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SCAMP3O14828 347 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 GPR39O43194 453 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 HOXC11O43248 304 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 SLCO2B1O94956 709 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SCELO95171 688 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CLPTM1O96005 669 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 RHOP08100 348 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ANXA6P08133 673 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SMIM18P0DKX4 95 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 SLC2A4P14672 509 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 PAX7P23759 505 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 GKP32189 559 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CCR7P32248 378 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CA5AP35218 305 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CCR2P41597 374 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 CCT8P50990 548 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 POLE2P56282 527 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CLDN8P56748 225 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 C21orf58P58505 322 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 RPL38P63173 70 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 PRKCQQ04759 706 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 ABRQ12979 859 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CSTF3Q12996 717 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 APOFQ13790 326 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 CAPRIN1Q14444 709 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 TEAD2Q15562 447 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
RTF1-206ENST00000560447 ZNF805Q5CZA5 627 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 PRSS36Q5K4E3 855 aa9.48□□□□□ -0.89
RTF1-206ENST00000560447 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms