RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KLHL25Q9H0H3 589 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 FAM60AQ9NP50 221 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 TFR2Q9UP52 801 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 AP1M2Q9Y6Q5 423 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 PDZD2O15018 2839 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 NCOA6Q14686 2063 aaPredicted RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 LIN7AO14910 233 aaPredicted RBP12.65□□□□□ -0.38
TPM1-220ENST00000559556 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
TPM1-220ENST00000559556 OR2B3O76000 313 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 PRSS56P0CW18 603 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 OTX2P32243 289 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 SHMT2P34897 504 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 PRKG2Q13237 762 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 RAPSNQ13702 412 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 SSPNQ14714 243 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 ZIC1Q15915 447 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
TPM1-220ENST00000559556 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 IGFL3Q6UXB1 125 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 MICALCLQ6ZW33 695 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 IQCKQ8N0W5 287 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 CLDN19Q8N6F1 224 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 TC2NQ8N9U0 490 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 OR5AR1Q8NGP9 310 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 TCTN2Q96GX1 697 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 OR2A14Q96R47 310 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 XKR8Q9H6D3 395 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 CASS4Q9NQ75 786 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
TPM1-220ENST00000559556 ADGRG4Q8IZF6 3080 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 A0A0J9YY10 115 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 WIPF3A6NGB9 483 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 QSOX1O00391 747 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 HCRTR1O43613 425 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 AP2A2O94973 939 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 IGHEP01854 428 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CD63P08962 238 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CBSLP0DN79 551 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 UGT2B7P16662 529 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 PTMSP20962 102 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 PSMA3P25788 255 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CTNNA2P26232 953 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 ACADLP28330 430 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CBSP35520 551 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CACNG1Q06432 222 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 DBN1Q16643 649 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 KYNUQ16719 465 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 DEFB110Q30KQ9 67 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 PLEKHN1Q494U1 663 aaPredicted RBP12.64□□□□□ -0.39
TPM1-220ENST00000559556 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 DCAF10Q5QP82 559 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 DARS2Q6PI48 645 aaKnown RBP12.64□□□□□ -0.39
TPM1-220ENST00000559556 PACS1Q6VY07 963 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 TRIM73Q86UV7 250 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CCDC170Q8IYT3 715 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 GALNT16Q8N428 558 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CLEC1AQ8NC01 280 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 N4BP2L2Q92802 583 aaPredicted RBP12.64□□□□□ -0.39
TPM1-220ENST00000559556 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
TPM1-220ENST00000559556 FER1L6-AS2Q96M78 137 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 FAM118BQ9BPY3 351 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 SRPK3Q9UPE1 567 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 B3GNT3Q9Y2A9 372 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 AKAP9Q99996 3911 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
TPM1-220ENST00000559556 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 A1L4Q6 167 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 ZSCAN9O15535 394 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 KRT86O43790 486 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 KLHL41O60662 606 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 CNOT3O75175 753 aaKnown RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 CBX6O95503 412 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 LDLRP01130 860 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 ALPPP05187 535 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 CHRM5P08912 532 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 FOLR3P41439 243 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 NSG1P42857 185 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 SOX8P57073 446 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 ITIH4Q14624 930 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 NR6A1Q15406 480 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 MLIPQ5VWP3 458 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 MRPL14Q6P1L8 145 aaKnown RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 UNC5AQ6ZN44 842 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 TAS2R42Q7RTR8 314 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 MAMDC2Q7Z304 686 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 TBC1D21Q8IYX1 336 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 OR5K2Q8NHB8 316 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms