RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 VPS9D1Q9Y2B5 631 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 DMXL2Q8TDJ6 3036 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 SRRM3A6NNA2 597 aaPredicted RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 NDC80O14777 642 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.56e-8■□□□□ 9.5
CASC4-209ENST00000559222 RASSF9O75901 435 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 ITGA2BP08514 1039 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 ECHS1P30084 290 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 CSTF2P33240 577 aaKnown RBP eCLIP18.15■□□□□ 0.5
CASC4-209ENST00000559222 MGAT5Q09328 741 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 EIF3IQ13347 325 aaKnown RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 FRG1Q14331 258 aaKnown RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 CACHD1Q5VU97 1274 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 PRSS42Q7Z5A4 293 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 CLEC14AQ86T13 490 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 AMIGO1Q86WK6 493 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 CPNE9Q8IYJ1 553 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 C2orf73Q8N5S3 287 aaPredicted RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 AGBL5Q8NDL9 886 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 SKA2Q8WVK7 121 aaPredicted RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 KCNJ9Q92806 393 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 NAF1Q96HR8 494 aaKnown RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 OLFM1Q99784 485 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 CTRCQ99895 268 aa18.15■□□□□ 0.5
CASC4-209ENST00000559222 ZNF768Q9H5H4 540 aaKnown RBP18.15■□□□□ 0.5
CASC4-209ENST00000559222 GSAPA4D1B5 854 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 C1orf105O95561 183 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 ANKRD34CP0C6C1 535 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 PVRP15151 417 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 RBMS1P29558 406 aaKnown RBP18.14■□□□□ 0.49
CASC4-209ENST00000559222 PKLRP30613 574 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 SLC5A2P31639 672 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 CAV1Q03135 178 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 KCNAB1Q14722 419 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 EFTUD2Q15029 972 aaKnown RBP eCLIP18.14■□□□□ 0.49
CASC4-209ENST00000559222 KLHL38Q2WGJ6 581 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.14■□□□□ 0.49
CASC4-209ENST00000559222 DNTTIP2Q5QJE6 756 aaKnown RBP18.14■□□□□ 0.49
CASC4-209ENST00000559222 UNC5DQ6UXZ4 953 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 TAX1BP1Q86VP1 789 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 DCBLD2Q96PD2 775 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 KLHL25Q9H0H3 589 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 CCDC68Q9H2F9 335 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 POMT2Q9UKY4 750 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 DHRS7Q9Y394 339 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 CELSR3Q9NYQ7 3312 aa18.14■□□□□ 0.49
CASC4-209ENST00000559222 TCRBV9S1A1TA0A576 114 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ARHGEF33A8MVX0 844 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 KPNA5O15131 536 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 MCM3P25205 808 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 MAGEA4P43358 317 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 KYNUQ16719 465 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ANKS6Q68DC2 871 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 KIAA0408Q6ZU52 694 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 PIWIL4Q7Z3Z4 852 aaKnown RBP18.13■□□□□ 0.49
CASC4-209ENST00000559222 DCUN1D3Q8IWE4 304 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 FAM20CQ8IXL6 584 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 CEP112Q8N8E3 955 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 GPATCH11Q8N954 259 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 LINC01555Q8NAE3 123 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 SNIP1Q8TAD8 396 aaKnown RBP18.13■□□□□ 0.49
CASC4-209ENST00000559222 DENND1AQ8TEH3 1009 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ZDHHC12Q96GR4 267 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ZNF578Q96N58 590 aaPredicted RBP18.13■□□□□ 0.49
CASC4-209ENST00000559222 TWSG1Q9GZX9 223 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 LRRC4CQ9HCJ2 640 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ACTR10Q9NZ32 417 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 ZFATQ9P243 1243 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 SEMA5BQ9P283 1151 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 B3GALT1Q9Y5Z6 326 aa18.13■□□□□ 0.49
CASC4-209ENST00000559222 TLCD2A6NGC4 264 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 MATN4O95460 622 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 CHRM5P08912 532 aaPredicted RBP18.12■□□□□ 0.49
CASC4-209ENST00000559222 ATP5DP30049 168 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 ERVPABLB-1P60509 514 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 HECTD2Q5U5R9 776 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 KLHL35Q6PF15 583 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 CYHR1Q6ZMK1 362 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 STRA8Q7Z7C7 330 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 GALNT7Q86SF2 657 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 ZFAND4Q86XD8 727 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 PALM2Q8IXS6 379 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 LSMEM2Q8N112 164 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 IFT81Q8WYA0 676 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 FGF11Q92914 225 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 MCMBPQ9BTE3 642 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 PHACTR1Q9C0D0 580 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 THSD1Q9NS62 852 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 SLC39A1Q9NY26 324 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 POLG2Q9UHN1 485 aa18.12■□□□□ 0.49
CASC4-209ENST00000559222 VPS26AO75436 327 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 EBLN1P0CF75 366 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 FOLR1P15328 257 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ST6GAL1P15907 406 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 UGT2B7P16662 529 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 FDXRP22570 491 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ITPKBP27987 946 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms