RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 UCK1Q9HA47 277 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC40A1Q9NP59 571 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 EIF2B3Q9NR50 452 aaKnown RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TRMT1Q9NXH9 659 aaKnown RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PISDQ9UG56 409 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PFDN2Q9UHV9 154 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 RIMKLBQ9ULI2 386 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TTC7AQ9ULT0 858 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PSMD13Q9UNM6 376 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TCAF1Q9Y4C2 921 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PCDHGA7Q9Y5G6 932 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACTL7BQ9Y614 415 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PIEZO2Q9H5I5 2752 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TCRBV7S3A2A0A539 114 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 HEATR9A2RTY3 570 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCDC162PA2VCL2 907 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MGAT4DA6NG13 374 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 C9orf172C9J069 976 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RRP8O43159 456 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZSCAN12O43309 604 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRAMEF10O60809 474 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TIAF1O95411 115 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 VIPP01282 170 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ATP1B2P14415 290 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MSNP26038 577 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC5A2P31639 672 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MAPK9P45984 424 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 LMAN1P49257 510 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 GFERP55789 205 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 BASP1P80723 227 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACVR1Q04771 509 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CACNG1Q06432 222 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TRIP13Q15645 432 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RPE65Q16518 533 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CYP1B1Q16678 543 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SKIDA1Q1XH10 827 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TMEM71Q6P5X7 295 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 GSTA5Q7RTV2 222 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ARHGAP22Q7Z5H3 698 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CLDN19Q8N6F1 224 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 KCNE4Q8WWG9 221 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 NCSTNQ92542 709 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RSC1A1Q92681 617 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CXorf40BQ96DE9 158 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 DCUN1D1Q96GG9 259 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 AHCYL2Q96HN2 611 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RMDN2Q96LZ7 410 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 OSBPL9Q96SU4 736 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 DPYSL5Q9BPU6 564 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 AP1M1Q9BXS5 423 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SSU72Q9NP77 194 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 FOXJ2Q9P0K8 574 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACSL6Q9UKU0 697 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 PYCARDQ9ULZ3 195 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 KLHL33A6NCF5 533 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 F8W735 103 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 PGRMC1O00264 195 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 NVLO15381 856 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 UBXN7O94888 489 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 GOT2P00505 430 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RALBP11234 206 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 FGF3P11487 239 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MTHFD1P11586 935 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TYRP1P17643 537 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TPSB2P20231 275 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ADRA1DP25100 572 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 COILP38432 576 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 HALP42357 657 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CAPZBP47756 277 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 VPS41P49754 854 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MAPK10P53779 464 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SESN2P58004 480 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CRADDP78560 199 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLBPQ14493 270 aaKnown RBP eCLIP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 KCNJ11Q14654 390 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TPSAB1Q15661 275 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 ANKRD22Q5VYY1 191 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC6A19Q695T7 634 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 DUS1LQ6P1R4 473 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 AFTPHQ6ULP2 937 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 C4orf22Q6V702 233 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SPATC1Q76KD6 591 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 TAS2R42Q7RTR8 314 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 JAMLQ86YT9 394 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 BMPERQ8N8U9 685 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 C2CD4AQ8NCU7 369 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 AGBL5Q8NDL9 886 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 HM13Q8TCT9 377 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 JPH3Q8WXH2 748 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 USP7Q93009 1102 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 HDAC10Q969S8 669 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 MAGOHBQ96A72 148 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 WWP1Q9H0M0 922 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 EPB41L1Q9H4G0 881 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CHRAC1Q9NRG0 131 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms