RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TUBB4BP68371 445 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 GPS2Q13227 327 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 KCNJ11Q14654 390 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 ZIC1Q15915 447 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
SMAD3-208ENST00000558827 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 CAND1Q86VP6 1230 aaKnown RBP12.12□□□□□ -0.47
SMAD3-208ENST00000558827 KMT5CQ86Y97 462 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 RASGEF1CQ8N431 466 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 SKA2Q8WVK7 121 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-208ENST00000558827 CPT1BQ92523 772 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 OSBPL9Q96SU4 736 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 TWSG1Q9GZX9 223 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 FAM60AQ9NP50 221 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 C1GALT1Q9NS00 363 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 CRYL1Q9Y2S2 319 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
SMAD3-208ENST00000558827 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 QSOX1O00391 747 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 NIPSNAP2O75323 286 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 APOA4P06727 396 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 TPSB2P20231 275 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 NR1D1P20393 614 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 PEBP1P30086 187 aaKnown RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 PPARGP37231 505 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 BDKRB1P46663 353 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 MAP7Q14244 749 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 PTCHD3Q3KNS1 767 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CCSMST1Q4G0I0 132 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 ZNF789Q5FWF6 425 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CDHR3Q6ZTQ4 885 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 TBC1D21Q8IYX1 336 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 ZNF669Q96BR6 464 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CLIP3Q96DZ5 547 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 OR2A14Q96R47 310 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 EFHD1Q9BUP0 239 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 KIFC1Q9BW19 673 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 FAM117AQ9C073 453 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 SLC7A5P2Q9GIP4 190 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CHST8Q9H2A9 424 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
SMAD3-208ENST00000558827 HEMK1Q9Y5R4 338 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-208ENST00000558827 CCDC88CQ9P219 2028 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
SMAD3-208ENST00000558827 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
SMAD3-208ENST00000558827 GPC4O75487 556 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 BANF1O75531 89 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 GSTM1P09488 218 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 CYP2A7P20853 494 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 AOAHP28039 575 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 SHMT2P34897 504 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 TTPAP49638 278 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 GSTM4Q03013 218 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 CHAF1BQ13112 559 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 KCNAB2Q13303 367 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 AARS2Q5JTZ9 985 aaKnown RBP12.1□□□□□ -0.47
SMAD3-208ENST00000558827 CTSL3PQ5NE16 218 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 C1orf189Q5VU69 101 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 CNSTQ6PJW8 725 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 SLC22A15Q8IZD6 547 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 OR5K2Q8NHB8 316 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 ASZ1Q8WWH4 475 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 N4BP2L2Q92802 583 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-208ENST00000558827 CAPZA3Q96KX2 299 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 P2RY12Q9H244 342 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 ACTL8Q9H568 366 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 GNPTGQ9UJJ9 305 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
SMAD3-208ENST00000558827 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 F8W8V4 182 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 K7EM74 188 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 MAP3K7O43318 606 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 KIF5CO60282 957 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 CPNE3O75131 537 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 CREG1O75629 220 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 MT-ND3P03897 115 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 CHRM3P20309 590 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 GRIA3P42263 894 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 FOXL2P58012 376 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 SARNPP82979 210 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 MC1RQ01726 317 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 CTBP1Q13363 440 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 SLC9A5Q14940 896 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 TMED2Q15363 201 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms