RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ADGRF3Q8IZF5 1079 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 IPMKQ8NFU5 416 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 OR1N1Q8NGS0 311 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 DLG3Q92796 817 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 THOC3Q96J01 351 aaKnown RBP17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 OLFM3Q96PB7 478 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 FSD1LQ9BXM9 530 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 COG4Q9H9E3 785 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 UVRAGQ9P2Y5 699 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 HIVEP1P15822 2718 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 CCDC78A2IDD5 438 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 C2orf81A6NN90 581 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 H3BMH7 237 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 SRP72O76094 671 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 NFKB1P19838 968 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 SHMT2P34897 504 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 CD151P48509 253 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 DYNLT1P63172 113 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 RBBP7Q16576 425 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 KDELC1Q6UW63 502 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 TMEM207Q6UWW9 146 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 HEXDCQ8WVB3 486 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 FKBP10Q96AY3 582 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 ULK4Q96C45 1275 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 LMF1Q96S06 567 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 CHRNA10Q9GZZ6 450 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 KLHL8Q9P2G9 620 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 PLCL2Q9UPR0 1127 aa17.16■□□□□ 0.34
TSPAN3-204ENST00000558394 A0A087X0T9 212 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 DYTNA2CJ06 578 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 PCDH17O14917 1159 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 SERPING1P05155 500 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 FAM228BP0C875 321 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 ATP1B2P14415 290 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 UGT2B7P16662 529 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 ITGAXP20702 1163 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 SSTR2P30874 369 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 ARSFP54793 590 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 CASP6P55212 293 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 MFAP5Q13361 173 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 PTPRCAPQ14761 206 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 VSIG1Q86XK7 387 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 CATSPER1Q8NEC5 780 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 TFB1MQ8WVM0 346 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 NR4A3Q92570 626 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 TFGQ92734 400 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 CCDC120Q96HB5 630 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 MRGPRX2Q96LB1 330 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 NRTNQ99748 197 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 NAT10Q9H0A0 1025 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 WDR54Q9H977 334 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 HS3ST3B1Q9Y662 390 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 ARL5AQ9Y689 179 aa17.15■□□□□ 0.34
TSPAN3-204ENST00000558394 A0A0J9YY10 115 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 SOCS6O14544 535 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 ALBP02768 609 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 UQCRHP07919 91 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 CD68P34810 354 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 MPP3Q13368 585 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 ZIC1Q15915 447 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 INAQ16352 499 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 SLC5A12Q1EHB4 618 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 KIRREL2Q6UWL6 708 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 TTLL10Q6ZVT0 673 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 OVCH1Q7RTY7 1134 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 PID1Q7Z2X4 250 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 OR4K2Q8NGD2 314 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 CTNNBL1Q8WYA6 563 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 COPS8Q99627 209 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 OR52A5Q9H2C5 316 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 SEMA3GQ9NS98 782 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 FKBPLQ9UIM3 349 aa17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 NXT1Q9UKK6 140 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-204ENST00000558394 A0A1B0GX78 115 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 HCRTR1O43613 425 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 SGTAO43765 313 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 ITGALP20701 1170 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 CAPN3P20807 821 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 GABRA4P48169 554 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 TDGF1P3P51864 188 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 RBPJQ06330 500 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 RPA4Q13156 261 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 BOP1Q14137 746 aaKnown RBP17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 MESDQ14696 234 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 TAF1AQ15573 450 aaPredicted RBP17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 XKRXQ6PP77 449 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 UNC5AQ6ZN44 842 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 TMEM151BQ8IW70 566 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 SYN2Q92777 582 aaPredicted RBP17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 OR2A14Q96R47 310 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 FCRL5Q96RD9 977 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 TRIM8Q9BZR9 551 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 SOX17Q9H6I2 414 aaPredicted RBP17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 SH3BGRL2Q9UJC5 107 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 ICKQ9UPZ9 632 aa17.13■□□□□ 0.33
TSPAN3-204ENST00000558394 TRAV17A0A0B4J275 112 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms