RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 ACACAQ13085 2346 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 C2orf74A8MZ97 194 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 C9orf172C9J069 976 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 E7ESA3 106 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 EIF3HO15372 352 aaKnown RBP eCLIP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 NIPSNAP2O75323 286 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 BANF1O75531 89 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 POLR2CP19387 275 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 ATP5DP30049 168 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 ABCG1P45844 678 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 SEPHS1P49903 392 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 MRPS25P82663 173 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 CAV1Q03135 178 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 ABRQ12979 859 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 PDIA2Q13087 525 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 FRG1Q14331 258 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 BROXQ5VW32 411 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 STEAP4Q687X5 459 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 DUPD1Q68J44 220 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 UNC5AQ6ZN44 842 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 KIAA0408Q6ZU52 694 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 VRK3Q8IV63 474 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 IGDCC3Q8IVU1 814 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 DCUN1D3Q8IWE4 304 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 C2CD4AQ8NCU7 369 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 MAGEC3Q8TD91 643 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 CFAP36Q96G28 342 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 USB1Q9BQ65 265 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 PPANQ9NQ55 473 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 KLHL42Q9P2K6 505 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
SLIRP-211ENST00000557623 PCM1Q15154 2024 aa12.13□□□□□ -0.47
SLIRP-211ENST00000557623 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 GSAPA4D1B5 854 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 POLR1CO15160 346 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 TP73O15350 636 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 LIPCP11150 499 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 NELFEP18615 380 aaKnown RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 CCNFP41002 786 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ARL4DP49703 201 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 PPP1CAP62136 330 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 IL11RAQ14626 422 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 HP1BP3Q5SSJ5 553 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 UGT3A1Q6NUS8 523 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 CNTN4Q8IWV2 1026 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 UNC5BQ8IZJ1 945 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ZBTB2Q8N680 514 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 SIDT2Q8NBJ9 832 aaKnown RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 CFAP61Q8NHU2 1237 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 SKA2Q8WVK7 121 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 KCNJ9Q92806 393 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 MAP3K3Q99759 626 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 C1GALT1Q9NS00 363 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 SIDT1Q9NXL6 827 aaKnown RBP12.12□□□□□ -0.47
SLIRP-211ENST00000557623 OR6C2Q9NZP2 312 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 POMT2Q9UKY4 750 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
SLIRP-211ENST00000557623 FRYQ5TBA9 3013 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 IGHV5-51A0A0C4DH38 117 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 STMND1H3BQB6 276 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 BTN3A3O00478 584 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 BTN3A1O00481 513 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 KLK10O43240 276 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 VPS26AO75436 327 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 HAUS5O94927 633 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ZBTB11O95625 1053 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 CDH3P22223 829 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 KPNA2P52292 529 aaKnown RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 UCNP55089 124 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 HSD11B2P80365 405 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 MPP1Q00013 466 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ACY1Q03154 408 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 FOXM1Q08050 763 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 GBX1Q14549 363 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 KYNUQ16719 465 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 TMTC4Q5T4D3 741 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms