RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NUP85Q9BW27 656 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MRPL9Q9BYD2 267 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MTMR12Q9C0I1 747 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 VN1R1Q9GZP7 353 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF556Q9HAH1 456 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 HHATLQ9HCP6 504 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PDRG1Q9NUG6 133 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PRMT7Q9NVM4 692 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 AIPL1Q9NZN9 384 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 WDR35Q9P2L0 1181 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CFAP45Q9UL16 551 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TRAF3IP3Q9Y228 551 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KIF3AQ9Y496 699 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KIAA1210Q9ULL0 1709 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 A6NL46 340 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ANXA2P2A6NMY6 339 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 H0Y626 953 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZNHIT1O43257 154 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SLC28A2O43868 658 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KLHL41O60662 606 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 WDR1O75083 606 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KDM4BO94953 1096 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FGFR1OPO95684 399 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 NGFRP08138 427 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SAGP10523 405 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 G6PDP11413 515 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 EPCAMP16422 314 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PTPN3P26045 913 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CDC25CP30307 473 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CCKARP32238 428 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 AHRP35869 848 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CAPZA2P47755 286 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MMP15P51511 669 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PPIDQ08752 370 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 HSPB3Q12988 150 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MFAP5Q13361 173 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF273Q14593 569 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 VWC2Q2TAL6 325 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF260Q3ZCT1 412 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KBTBD12Q3ZCT8 623 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM35AQ53FP2 167 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 HHATQ5VTY9 493 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF549Q6P9A3 640 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SLC36A4Q6YBV0 504 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FOXL2NBQ6ZUU3 175 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 AACSQ86V21 672 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PEX5LQ8IYB4 626 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CARNMT1Q8N4J0 409 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM19Q96HH6 336 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FNBP1Q96RU3 617 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PKP4Q99569 1192 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 WACQ9BTA9 647 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 LMF2Q9BU23 707 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 APOL6Q9BWW8 343 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TM6SF1Q9BZW5 370 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 DBNDD1Q9H9R9 158 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 UPF2Q9HAU5 1272 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CCPG1Q9ULG6 757 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 GRID1Q9ULK0 1009 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 LIPGQ9Y5X9 500 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 VIRMAQ69YN4 1812 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TEX13DA0A0J9YY54 714 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 A0A1W2PPM1 405 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MED19A0JLT2 244 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FAM170AA1A519 330 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 C2CD4DB7Z1M9 353 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SLCO1B7G3V0H7 640 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SYNCRIPO60506 623 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SOCS5O75159 536 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 B3GALNT1O75752 331 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 WDPCPO95876 746 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PAK4O96013 591 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ALPLP05186 524 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CSN3P07498 182 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 INHBAP08476 426 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 P4HA1P13674 534 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CBLP22681 906 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 EEF1B2P24534 225 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CORO1AP31146 461 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MAP2K2P36507 400 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 DCTP40126 519 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 RPL21P46778 160 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ART1P52961 327 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PPP5CP53041 499 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 POLGP54098 1239 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ZBTB17Q13105 803 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MYBPHQ13203 477 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SNTA1Q13424 505 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PLCB4Q15147 1175 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MEP1AQ16819 746 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FAM98BQ52LJ0 330 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 METTL11BQ5VVY1 283 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CAPRIN2Q6IMN6 1127 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 IL27RAQ6UWB1 636 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 C15orf39Q6ZRI6 1047 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MEPCEQ7L2J0 689 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CAMKMTQ7Z624 323 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TIGD4Q8IY51 512 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MARVELD2Q8N4S9 558 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms