RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NAA15Q9BXJ9 866 aaKnown RBP8.99□□□□□ -0.97
NEDD1-211ENST00000557454 SLC26A1Q9H2B4 701 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 GNPTGQ9UJJ9 305 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 NXT1Q9UKK6 140 aaKnown RBP8.99□□□□□ -0.97
NEDD1-211ENST00000557454 CHKBQ9Y259 395 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 A0A1B0GX78 115 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 EEF2KO00418 725 aaKnown RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 EEF1DP29692 281 aaKnown RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 PBLDP30039 288 aaPredicted RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 PTGS2P35354 604 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 ST13P50502 369 aaKnown RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 EEF1A2Q05639 463 aaKnown RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 KRTAP1-1Q07627 177 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 FLYWCH1Q4VC44 716 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 RALGPS1Q5JS13 557 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 NAA35Q5VZE5 725 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 TLDC1Q6P9B6 456 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 TRIM65Q6PJ69 517 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 TTLL10Q6ZVT0 673 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 NDUFAF7Q7L592 441 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 YTHDF3Q7Z739 585 aaKnown RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 AMZ2Q86W34 360 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 METTL27Q8N6F8 245 aaPredicted RBP8.98□□□□□ -0.97
NEDD1-211ENST00000557454 GPR26Q8NDV2 337 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 LPCAT1Q8NF37 534 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 SIGLEC12Q96PQ1 595 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 ZSCAN5AQ9BUG6 496 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 C19orf24Q9BVV8 132 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 WWP1Q9H0M0 922 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 SRMSQ9H3Y6 488 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 TAS2R14Q9NYV8 317 aa8.98□□□□□ -0.97
NEDD1-211ENST00000557454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.98□□□□□ -0.972e-7■■■□□ 15.8
NEDD1-211ENST00000557454 A0A1B0GTH9 108 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 RGSL1A5PLK6 1076 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 CCP110O43303 1012 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 POP7O75817 140 aaKnown RBP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 PRLP01236 227 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 ZNF24P17028 368 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 BMP7P18075 431 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 SLC9A1P19634 815 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 HTR7P34969 479 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 RAB28P51157 221 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 KLC1Q07866 573 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 GTF2H3Q13889 308 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 IHHQ14623 411 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 VWA3BQ502W6 1294 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 ANKRD20A8PQ5CZ79 823 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TXNRD3NBQ6F5E7 133 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TTI2Q6NXR4 508 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 MCATQ8IVS2 390 aaKnown RBP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TRIM59Q8IWR1 403 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 BBS5Q8N3I7 341 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TRAM1L1Q8N609 369 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 MDS2Q8NDY4 140 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 CCHCR1Q8TD31 782 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 LCN9Q8WX39 176 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 ZNF592Q92610 1267 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 EID2BQ96D98 161 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 FAM81BQ96LP2 452 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 LYSMD1Q96S90 227 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TDRD1Q9BXT4 1180 aaKnown RBP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TP63Q9H3D4 680 aaPredicted RBP8.97□□□□□ -0.97
NEDD1-211ENST00000557454 APEX2Q9UBZ4 518 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 ADGRE2Q9UHX3 823 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 TMPRSS11EQ9UL52 423 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 MKL2Q9ULH7 1088 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 HPSEQ9Y251 543 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 CPAMD8Q8IZJ3 1885 aa8.97□□□□□ -0.97
NEDD1-211ENST00000557454 VSTM2BA6NLU5 285 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 DAPK3O43293 454 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 LSM8O95777 96 aaKnown RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 ONECUT2O95948 504 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 MT-CYBP00156 380 aaPredicted RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 SLC4A1P02730 911 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 PIM1P11309 404 aaPredicted RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 NID1P14543 1247 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 ERCC2P18074 760 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 GPD1P21695 349 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 MMP13P45452 471 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 OR1D4P47884 311 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 CARSP49589 748 aaKnown RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 NOMO3P69849 1222 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 CUL4AQ13619 759 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 TUBA3CQ13748 450 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 CA9Q16790 459 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 C10orf62Q5T681 223 aaPredicted RBP8.96□□□□□ -0.98
NEDD1-211ENST00000557454 PDPK2PQ6A1A2 396 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 TUBA3EQ6PEY2 450 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 RIPOR1Q6ZS17 1223 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 NLRP9Q7RTR0 991 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 GALNTL5Q7Z4T8 443 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 PAQR7Q86WK9 346 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 BEST3Q8N1M1 668 aa8.96□□□□□ -0.98
NEDD1-211ENST00000557454 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms