RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
SHMT2-229ENST00000557348 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 LRRC14BA6NHZ5 514 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SLCO2B1O94956 709 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 EIF2S1P05198 315 aaKnown RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 EPHX1P07099 455 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SNRPB2P08579 225 aaKnown RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 PRR35P0CG20 571 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 HGFP14210 728 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 PEX2P28328 305 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 HMOX2P30519 316 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 GDI1P31150 447 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 CA5AP35218 305 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 RPIAP49247 311 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 TXNL4AP83876 142 aaKnown RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SLC25A3Q00325 362 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SEMG2Q02383 582 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 HSPA14Q0VDF9 509 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 MAD2L1Q13257 205 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ENPP2Q13822 863 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 GTF2H3Q13889 308 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 RPS6KA2Q15349 733 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 KIF19Q2TAC6 998 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 GRAMD1BQ3KR37 738 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SLC44A4Q53GD3 710 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 TMEM198Q66K66 360 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 BNC2Q6ZN30 1099 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 DEFB107AQ8IZN7 70 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 PCYOX1LQ8NBM8 494 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ZFP28Q8NHY6 868 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ELMO1Q92556 727 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ARRDC3Q96B67 414 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ROPN1LQ96C74 230 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 MYADMQ96S97 322 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
SHMT2-229ENST00000557348 IPPKQ9H8X2 491 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ARL15Q9NXU5 204 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 SARDHQ9UL12 918 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 C2orf16Q68DN1 1984 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 MYOFQ9NZM1 2061 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 PLXNA2O75051 1894 aa12.37□□□□□ -0.43
SHMT2-229ENST00000557348 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 MEI4A8MW99 385 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 GFYI3L273 518 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 TSPAN6O43657 245 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 VEGFDO43915 354 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 SLC34A2O95436 690 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 CATP04040 527 aaKnown RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 BMP1P13497 986 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 HLA-EP13747 358 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 CDH2P19022 906 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 MAP4P27816 1152 aaKnown RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ERVK-8P63133 956 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 TMEM115Q12893 351 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 GRIN2CQ14957 1233 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 TLR1Q15399 786 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 GGTA1PQ4G0N0 100 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 AGKQ53H12 422 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 RFLNAQ6ZTI6 216 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 MILR1Q7Z6M3 343 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 DSELQ8IZU8 1212 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ZNF366Q8N895 744 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 METTL6Q8TCB7 284 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 ADAMTS16Q8TE57 1224 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 PYDC1Q8WXC3 89 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 CCM2Q9BSQ5 444 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 OSBPL11Q9BXB4 747 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 SLC32A1Q9H598 525 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 PRSS16Q9NQE7 514 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 SDR39U1Q9NRG7 319 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 G3BP2Q9UN86 482 aaKnown RBP12.36□□□□□ -0.43
SHMT2-229ENST00000557348 NDUFAF1Q9Y375 327 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 MYO7AQ13402 2215 aa12.36□□□□□ -0.43
SHMT2-229ENST00000557348 C17orf113A0A1B0GUU1 675 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 SLC28A1O00337 649 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 TXNDC9O14530 226 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 AIM2O14862 343 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 TAPBPO15533 448 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 LINC01565O15544 149 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-229ENST00000557348 OR4F21O95013 312 aa12.35□□□□□ -0.43
SHMT2-229ENST00000557348 GUCA1CO95843 209 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms