RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 METTL21CQ5VZV1 264 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ZNF470Q6ECI4 717 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CXorf57Q6NSI4 855 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 CGB2Q6NT52 195 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ZCCHC8Q6NZY4 707 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 KLC3Q6P597 504 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 NCEH1Q6PIU2 408 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ZYG11AQ6WRX3 759 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 GDF7Q7Z4P5 450 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 PTAR1Q7Z6K3 402 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 TMC8Q8IU68 726 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 C10orf107Q8IVU9 208 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 WDR75Q8IWA0 830 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 MFN1Q8IWA4 741 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CMTM8Q8IZV2 173 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 FITM2Q8N6M3 262 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 DCAF4L2Q8NA75 395 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 OR13J1Q8NGT2 312 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 OR4L1Q8NH43 312 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TTC8Q8TAM2 541 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 BLOC1S5Q8TDH9 187 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 WBP2Q969T9 261 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ISG20Q96AZ6 181 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 OTUB2Q96DC9 234 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ALG14Q96F25 216 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ELMO2Q96JJ3 720 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 PRICKLE1Q96MT3 831 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 TRIB3Q96RU7 358 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC22A12Q96S37 553 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TTC1Q99614 292 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 OMDQ99983 421 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 MRPL57Q9BQC6 102 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 HTATIP2Q9BUP3 242 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC2A11Q9BYW1 496 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ILKAPQ9H0C8 392 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 WWP1Q9H0M0 922 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 STN1Q9H668 368 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 CAB39LQ9H9S4 337 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 POPDC3Q9HBV1 291 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 MAGEE1Q9HCI5 957 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TXLNGQ9NUQ3 528 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ABCB8Q9NUT2 735 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 INTS10Q9NVR2 710 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 NLE1Q9NVX2 485 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 OXSMQ9NWU1 459 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ZDHHC7Q9NXF8 308 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 H2AFY2Q9P0M6 372 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 TMEM216Q9P0N5 145 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 DNMT3BQ9UBC3 853 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 COPG2Q9UBF2 871 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 HEY2Q9UBP5 337 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC2A6Q9UGQ3 507 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 EMCNQ9ULC0 261 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 APOBEC2Q9Y235 224 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 CHKBQ9Y259 395 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 RAI2Q9Y5P3 530 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 EVPLQ92817 2033 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 A0A1W2PQ67 120 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CCDC162PA2VCL2 907 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 LINC01553A4QN01 128 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 HIDE1A8MVS5 230 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ANKRD65E5RJM6 399 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 G3V2L1 256 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 GRM6O15303 877 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 STX7O15400 261 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 CCL16O15467 120 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SNAP91O60641 907 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 NDUFS3O75489 264 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TMCC1O94876 653 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 POP4O95707 220 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 CD160O95971 181 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 PENKP01210 267 aaPredicted RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 LTA4HP09960 611 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 SLC35E2BP0CK96 405 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 OGNP20774 298 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 ATP5F1P24539 256 aaPredicted RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 CSKP41240 450 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SLC1A2P43004 574 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TTPAP49638 278 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SGSHP51688 502 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 EPHB1P54762 984 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 AQP5P55064 265 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TAS2R39P59534 338 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 DNAJB13P59910 316 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ABCE1P61221 599 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 POLR2LP62875 67 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 IRX4P78413 519 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ARF5P84085 180 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 RAD51Q06609 339 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 BCL2L1Q07817 233 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms