RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RAD23BP54727 409 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PRMT2P55345 433 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 EIF3BP55884 814 aaKnown RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 CBX1P83916 185 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 BEX3Q00994 111 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SP3Q02447 781 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 CALCOCO2Q13137 446 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TDGQ13569 410 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PTPRRQ15256 657 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TRADDQ15628 312 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ZBTB6Q15916 424 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 MEP1BQ16820 701 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PREPLQ4J6C6 727 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 ZRANB3Q5FWF4 1079 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 XKR4Q5GH76 650 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ARHGAP17Q68EM7 881 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PLAG1Q6DJT9 500 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TWF2Q6IBS0 349 aaKnown RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 NCEH1Q6PIU2 408 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 CCDC137Q6PK04 289 aaKnown RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 LCLAT1Q6UWP7 414 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 LRIG3Q6UXM1 1119 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ALKAL1Q6UXT8 129 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 RGS9BPQ6ZS82 235 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PPP1R32Q7Z5V6 425 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 CDR2LQ86X02 465 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 MPP5Q8N3R9 675 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 DNAJC5GQ8N7S2 189 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 POC5Q8NA72 575 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SLC4A11Q8NBS3 891 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PSD4Q8NDX1 1056 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SETD6Q8TBK2 473 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 IFT81Q8WYA0 676 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SLCO2A1Q92959 643 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 FBXL20Q96IG2 436 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 VPS50Q96JG6 964 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 LBHD1Q9BQE6 289 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 ERP44Q9BS26 406 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 UBXN6Q9BZV1 441 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TINAGL1Q9GZM7 467 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 DDX47Q9H0S4 455 aaKnown RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 SNX25Q9H3E2 840 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SMOC2Q9H3U7 446 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 GOLPH3Q9H4A6 298 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 NCOR1P1Q9H4R4 102 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 LRRC19Q9H756 370 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ACP6Q9NPH0 428 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SEMA4BQ9NPR2 832 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 PFDN4Q9NQP4 134 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PCDHB16Q9NRJ7 776 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SEMA4GQ9NTN9 838 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 GDAP2Q9NXN4 497 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SMARCAL1Q9NZC9 954 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 EHD2Q9NZN4 543 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 IL19Q9UHD0 177 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SARDHQ9UL12 918 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 CLDN16Q9Y5I7 305 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PDCD11Q14690 1871 aaKnown RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 SMIM28A0A1B0GU29 152 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TCRBV5S1A1TA0A578 114 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 WDR27A2RRH5 827 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 A8MXQ7 604 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 KPNA7A9QM74 516 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 M0QYV0 167 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 RAB27BO00194 218 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 O00370 1275 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PIRO00625 290 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 BCAT2O15382 392 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 TTI1O43156 1089 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 HUS1O60921 280 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 COQ9O75208 318 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CSDE1O75534 798 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 ZNF189O75820 626 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 TOMM70O94826 608 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 ELFN1P0C7U0 828 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CDH2P19022 906 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 PSMA2P25787 234 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 LRPAP1P30533 357 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SLC5A2P31639 672 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 RPL9P32969 192 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 PCK1P35558 622 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 HSPA9P38646 679 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 ACAA2P42765 397 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 SLC11A2P49281 568 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 LUMP51884 338 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 NDST1P52848 882 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 RPL7AP62424 266 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 GBE1Q04446 702 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 BST2Q10589 180 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 PDCLQ13371 301 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SLC29A2Q14542 456 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TRIP12Q14669 1992 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 CRYMQ14894 314 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CLCA4Q14CN2 919 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TRIP11Q15643 1979 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 DEFB115Q30KQ5 88 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 C9orf57Q5W0N0 161 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 DUPD1Q68J44 220 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 DGAT2L7PQ6IED9 249 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 KLHL35Q6PF15 583 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms